Query= MSMg01no306_b14.b1 MSMg01no306_b14.b1 CHROMAT_FILE:
MSMg01no306_b14.b1 PHD_FILE: MSMg01no306_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:46 2005
(642 letters)
>mm_chr10_59990589_59991629
Length = 1041
Score = 1172 bits (606), Expect = 0.0
Identities = 633/642 (98%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 1 ccatttgcgagtgagtctttcttcacatttggtcatctcatgacccctctgttccatttc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 841 ccatttgcgagtgagtctttcttcgcatttggtcatctcatgacccctctgttccatttc 782
Query: 61 atatgacttccttcccttagctcagagaccttagcatatcgttgtgtattcatgctaccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctatgacttccttcccttagctcagagaccttagcatatcgttgtgtattcatgctaccc 722
Query: 121 atggtctggcaagttcctgagaagctactgcgtccatgctctgggggcagggtgagcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atggtctggcaagttcctgagaagctactgcgtccatgctctgggggcagggtgagcgct 662
Query: 181 tttacaaggggtgcagcccagttgaggaagacagatgaagcggtgagttgggtcccgtct 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttacaaggggtgcagcccagctgaggaagacagatgaagcggtgagttgggtcccgtct 602
Query: 241 cttctaatcatctgaccagccccatagtcccattgtgcatctgcttctcttagctccccc 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttctaagca-ctgaccagccccatagtcccattgtgcatctgcttctcttagctccccc 543
Query: 301 actggaaaggggatccccgcttccccatcccctccaagccaatccccacaagctccaggt 360
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 actggaaaagggatccccacttccccatcccctccaagccaatccccacaagctccaggt 483
Query: 361 cccatgtctccaggctgctaatcagtttccatgccttgatctggatctccgtgtcccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cccatgtctccaggctgctaatcagtttccatgccttgatctggatctccgtgtcccttt 423
Query: 421 agtgtgacgcgctgatttcgcacactcgttccctagctgggtctgggctgagatgcagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agtgtgacgcgctgatttcgcacactcgttccctagctgggtctgggctgagatgcagca 363
Query: 481 tggcctgttccatacccctaggataggaggacccaggcatccctcatgcccagccctgtc 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggcctgttccataaccctaggataggaggacccaggcatccctcatgcccagccctgtc 303
Query: 541 tccgaggctcctagggtccctgtcaagaccctgtcccgccctcctggctccccgccccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 302 tccgaggctcctagggtccctgtcaagaccctgtcccgccctcctggctcccccccccct 243
Query: 601 ttatctgtggctcccagcatgtatacttccctctatcagtgt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttatctgtggctcccagcatgtatacttccctctatcagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_b14.g1 MSMg01no306_b14.g1 CHROMAT_FILE:
MSMg01no306_b14.g1 PHD_FILE: MSMg01no306_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:46 2005
(660 letters)
>mm_chr10_59817153_59818212
Length = 1060
Score = 1176 bits (608), Expect = 0.0
Identities = 647/660 (98%)
Strand = Plus / Plus
Query: 1 aacccaggtcctctggaagaacagccagtgcttttaagcattgcgccaactccccgagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccaggtcctctggaagaacagccagtgcttttaagcattgcgccaactccccgagcc 260
Query: 61 ataaatccataccttttcaagccagcaaccccacaaaacaaaggaaaacacctacattag 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ataaatccataccttttcaagtcagcaaccccacaaaacaaaggaaaacacctatattag 320
Query: 121 gggtcagatgcaaggtctgaaggctagaggggctctgtgggcttccagcttggcaatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtcagatgcaaggtctgaaggctagaggggctctgtgggcttccagcttggcaatggt 380
Query: 181 ccatgccggggttgaagctgtactccagtggtcccttgctgtgggatggtgaaccagcaa 240
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ccatgccagggttgaagccgtactccagtggtcccttgctgtgggatggtgaaccagaaa 440
Query: 241 gctgctttactctgtctatggacttggtctccttttgtgaaacaggaaggctccagccct 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgcttcactctgtctatggacttggtctccttttgtgaaacaggaaggctccagccct 500
Query: 301 actctctctggctgtcacaggcaccacacacgcctgggcatccctgcatctcacagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actctctctggctgtcacaggcaccacacacgcctgggcatccctgcatctcacagtttt 560
Query: 361 ctgggaagcctatttgtcttgaggtaattatggttcaggccctgactccagacctgctac 420
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ctgggaagcctgtttgtcttgaggtaattatggttcaggccctgactctagacctgctac 620
Query: 421 aacttcagccaaaccactttcccttcctgggcctgtctctgcctgaaaaggagatcgtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacttcagccaaaccactttcccttcctgggcctgtctctgcctgaaaaggagatcgtat 680
Query: 481 ctcaccaaagatggtctgaaatctctgctcaccttggcaacaacattccagaaatctctc 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcaccaaagatggtctgaaatctcagctcaccttggcaacaacattccagaaatctctc 740
Query: 541 tctgtgtgtaagcagagctggcggctggctccagaatgcctgtcttccttactttgtagc 600
||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||
Sbjct: 741 tctgtgtgtaagcagagctggcgactggctccggaatgtctgtattccttactttgtagc 800
Query: 601 cctaagactccgctcctccaggcattctttgggaccttcctactgtaatttacacacaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctaagactccgctcctccaggcattctttgggaccttcctactgtaatttacacacaca 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
