Query= MSMg01no307_l11.b1 MSMg01no307_l11.b1 CHROMAT_FILE:
MSMg01no307_l11.b1 PHD_FILE: MSMg01no307_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:50 2005
(238 letters)
>mm_chr10_45570334_45570971
Length = 638
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Minus
Query: 1 tcattgagttgggtggttaatttttatgtcattttggatgttgtcttttgtccacctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcattgagttgggtggttaatttttatgtcattttggatgttgtcttttgtccacctcag 379
Query: 61 ccccactttcattcttcctactgggacgagggaattgcattccgttccagtaaagcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccccactttcattcttcctactgggacgagggaattgcattccgttccagtaaagcctcc 319
Query: 121 agacttgggcttactcctctctgcaacacgattaaattgcctgcattgttccaatggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agacttgggcttactcctctctgcaacacgattaaattgcctgcattgttccaatggctg 259
Query: 181 ctccttccctggagccaagttggcaaggctgtgttttgagctgcagcactttaatctg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctccttccctggagccaagttggcaaggctgtgttttgagctgcagcactttaatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no307_l11.g1 MSMg01no307_l11.g1 CHROMAT_FILE:
MSMg01no307_l11.g1 PHD_FILE: MSMg01no307_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:50 2005
(282 letters)
>mm_chr10_45372090_45372770
Length = 681
Score = 484 bits (250), Expect = e-141
Identities = 274/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 atgagacagttggttagtgaactaaatatgtttaaaataaatatttgaaaatcaatttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagacagttggttagtgaactaaatatgtttaaaataaatatttgaaaatcaatttgt 260
Query: 61 ttggttccacctaatgtgttcatattttaattttttcactttcagtttatctagcaatta 120
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 261 ttggttccacctaatgtgttcatattttaa-tttttcattttcagtttatctagcaatta 319
Query: 121 tgatgcgcagatgaagagccttctgaggattgtgaggatattttgtcatgtctttcgaat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgatgcgcagatgaagagccttttgaggattgtgaggatattttgtcatgtctttcgaat 379
Query: 181 tggtccctcatctcccagtaatggaatcgatatgggctacaatggaaataaaactccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggtccctcatctcccagtaatggaatcgatatgggctacaatggaaataaaactccaag 439
Query: 241 aattcttttgttcaaggtcagaaacgttgttgttaggaggta 282
|| | ||||||||||||||||||||||||||||||||||
Sbjct: 440 aagccaggtgttcaaggtcagaaacgttgttgttaggaggta 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
