Query= MSMg01no308_g03.b1 MSMg01no308_g03.b1 CHROMAT_FILE:
MSMg01no308_g03.b1 PHD_FILE: MSMg01no308_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:41 2005
(313 letters)
>mm_chr10_95952684_95953396
Length = 713
Score = 464 bits (240), Expect = e-135
Identities = 249/252 (98%)
Strand = Plus / Minus
Query: 62 gacaaaacctaaaggaagaacaaatcaaagtttttctcttcattgtggtcactagtatca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gacaaaacctaaaggaagaacaaatcaaagtttttctcttcattgtggtcactagtatca 313
Query: 122 ttgttggtattattgatctaacatagagacctacaggcagaagggaagtataataactgg 181
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 312 ttgttggtattgttgatctaacatagagacctacaggcagaagggaagtatgataactgg 253
Query: 182 gtgtggtaccacatgctaataatatattggcacctgggagaaagaggtaggaggattaca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtgtggtaccacatgctaataatatattggcacctgggagaaagaggtaggaggattaca 193
Query: 242 aaaaaaggtaagcctgggctatacaatgagatcctggatcagaaaagtaatgtgtatggt 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaaaaaggtaagcctgggctatacaatgagatcctggatcagaaaagtaatgtgtatggg 133
Query: 302 aattatagggag 313
||||||||||||
Sbjct: 132 aattatagggag 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_g03.g1 MSMg01no308_g03.g1 CHROMAT_FILE:
MSMg01no308_g03.g1 PHD_FILE: MSMg01no308_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:41 2005
(344 letters)
>mm_chr10_95778930_95779674
Length = 745
Score = 640 bits (331), Expect = 0.0
Identities = 340/343 (99%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 ccaacagaaatgatgaaatattaatgatcatgattcatataaaattcagtttctcttaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ccaacagaaatgatgaaatattaatgatcatgattcatataaaattcagtttttcttaat 260
Query: 61 aagtcaggcagaaagcagaggtctaggtttaataaccctttagagccaaggagataactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtcaggcagaaagcagaggtctaggtttaataaccctttagagccaaggagataactg 320
Query: 121 gaggctttt-gtgagttagtctactttaaagggctccattttgaagtactgtatgattga 179
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gaggctttttgtgagttagtctactttaaagggctacattttgaagtactgtatgattga 380
Query: 180 cacatacctctttaatatcaataaccatcaaacagtaccaatagagaaatgtgcaggtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacatacctctttaatatcaataaccatcaaacagtaccaatagagaaatgtgcaggtgt 440
Query: 240 caagttcaatagtttccacatgcagtttcattagtaagtggaaagtcccaaattggttaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagttcaatagtttccacatgcagtttcattagtaagtggaaagtcccaaattggttaa 500
Query: 300 gtgattaaatttctgtcactgccaaatcattgtggggaacagg 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgattaaatttctgtcactgccaaatcattgtggggaacagg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 745
Length adjustment: 9
Effective length of query: 335
Effective length of database: 736
Effective search space: 246560
Effective search space used: 246560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
