Query= MSMg01no308_j19.b1 MSMg01no308_j19.b1 CHROMAT_FILE:
MSMg01no308_j19.b1 PHD_FILE: MSMg01no308_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:59 2005
(327 letters)
>mm_chr10_54431910_54432637
Length = 728
Score = 572 bits (296), Expect = e-168
Identities = 317/324 (97%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaatctagaacacacagaaaagaacaaaaaacttcaaatattaataaaaataaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatctagaacacacagaaaagaacaaaaaacttcaaatattaataaaaataaa 264
Query: 65 caaacccataaaactgagctatgaaactatggaactcaacaaggtgttccc-aaaagaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 caaacccataaaactgagctatgaaactatggaactcaacaaggtgttcccaaaaagaag 324
Query: 124 aaatacaaatgaatgattcattattttcaagtgtccaatgtccacagctattattggaat 183
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 aaatacaaatgactgattcattattttcaagtgtccaatgtccacagctattatgggaat 384
Query: 184 atgattctatcacactttagacataatagaaagcaagaaaacaaacaacattaaaatgct 243
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgattctatctcactttagacataatagaaagcaagaaaacaaacaacattaaaatgct 444
Query: 244 ggttaggttgcaagaatggggaaaacttagtcactactggtcttactgtaaactgttgag 303
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 445 ggttaggttgcaagaatggggaacacttagtcactactggtcggactgtaaactgttgag 504
Query: 304 agccagactgatccaaggctttct 327
||||||||||||||||||||||||
Sbjct: 505 agccagactgatccaaggctttct 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_j19.g1 MSMg01no308_j19.g1 CHROMAT_FILE:
MSMg01no308_j19.g1 PHD_FILE: MSMg01no308_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:59 2005
(296 letters)
>mm_chr10_54594524_54595220
Length = 697
Score = 511 bits (264), Expect = e-149
Identities = 285/294 (96%), Gaps = 5/294 (1%)
Strand = Plus / Minus
Query: 2 ctagataggctcagaagcatcaggagctgtgcaatctcagtgagcacaaaattgctgggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctagataggctcagaagcatcaggagctgtgcaatctcagtgagcacaaaattgctgggg 364
Query: 62 aattttatt-ggtaccaccaatatcaattattatcctcttttgctctcatcaatcaaata 120
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 363 aattttattaggtaccaccaatattaattattatcctcttttgctctcatcaatcaaata 304
Query: 121 tctttctacaaattcaatttctttttgtcttataactgaacatgtccataaataccagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tctttctacaaattcaatttctttttgtcttataactgaacatgtccataaataccagga 244
Query: 181 attaagatttggacatttaattgtgaaatattcttttgcttaatatacatacata----t 236
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 243 attaagatttggacatttaatggtgaaatattcttttgcttaatatacatatatacatct 184
Query: 237 atatatgtatatcaagcaaaagaatattatatatatatgtgtgtgtgtgtgtgt 290
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atatatgtatattaagcaaaagaatattatatatatatgtgtgtgtgtgtgtgt 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 697
Length adjustment: 9
Effective length of query: 287
Effective length of database: 688
Effective search space: 197456
Effective search space used: 197456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
