Query= MSMg01no311_a08.b1 MSMg01no311_a08.b1 CHROMAT_FILE:
MSMg01no311_a08.b1 PHD_FILE: MSMg01no311_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:45 2005
(588 letters)
>mm_chr10_29449886_29450873
Length = 988
Score = 1029 bits (532), Expect = 0.0
Identities = 571/584 (97%)
Strand = Plus / Minus
Query: 5 gaattcactcggacaaccggatttttctacggcaaagctttattgcttcatctgaaggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 gaattcactcggacaaccggatttttctacggcaaagctttattgcttcatctgaaggaa 847
Query: 65 gaccccgaacaaggaaaatggtgctgcttatatagccctctgtgtgacgtgtcagctcct 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gaccccgaacagggaaaatggtgctgcttatatagccctctgtgtgacgtgtcagctcct 787
Query: 125 gattagctgctcactcatcaccccactactacgccctgggatgggcagtgacttggcaca 184
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 786 gattagctgctcactcatcaccccactactacgccccgggatgggcagtgagttggcaca 727
Query: 185 aatttactcttgcacctgcgcacattacttgtttaccagttaggcacagcggaggctcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aatttactcttgcacctgcgcacattacttgtttaccagttaggcacagcggaggctcat 667
Query: 245 gatgacgattgctcatggctctccacagtctgagagtagctagttgcttcttaaacattt 304
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 666 gatggcgattgctcacggctctccacagtctgagagtagctagttgcttcttaaaccttt 607
Query: 305 cttatttgttttgaggaactcacttcacatcaggcctatttcacccacatcgtgcgcagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cttatttgttttgaggaactcacttcacatcaggcctatttcacccacatcgtgcgcagg 547
Query: 365 catgtcatctgccaacaaacttctgtgtcaggttgtggtagcctcttcctcactaaactc 424
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 catgtcatctgtcaataaacttctgtgtcaggttgtggtagcctcttcctcactaaactc 487
Query: 425 ttcccattgtgcttcttataaaatttaataattattggaagtgtgagggacatgtatgtc 484
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttcccattgtgcttcttataaattttaataattattggaagtgtgagggacatgtatgtc 427
Query: 485 tttttgcatgatgtctgtgagtgtgagatttttgtgtgtgtgaggcacatgcatgtgtgt 544
||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 426 tttatgcatgatgtctgtgagtgtgagatttctgtgtgtgtgaggcacatgtatgtgtgt 367
Query: 545 gatctgcatacattatggatgtgtttgtatgtgtgtatatgatg 588
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gatctacatacattatggatgtgtttgtatgtgtgtatatgatg 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_a08.g1 MSMg01no311_a08.g1 CHROMAT_FILE:
MSMg01no311_a08.g1 PHD_FILE: MSMg01no311_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:45 2005
(296 letters)
>mm_chr10_29433847_29434542
Length = 696
Score = 505 bits (261), Expect = e-147
Identities = 285/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 tgttactttctacatgtagccgttttcaacccagactggatacatttaaatctggaaagc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttactttctacatgtaaccgttttcaacccagactggatacatttaaatctggaaagc 260
Query: 61 aacaaaggagactagtatagtagacagaaaaaagatgccttgcatttttgcccactatag 120
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 261 aacaaaggagactagtatagtagacagaaaaaagatgccttaca-ttttgcccactatag 319
Query: 121 tcgggttctaacattcaagttggctgttactaaagctttccaaattctccccagatcaat 180
|| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 320 tcaggttctaacattcaagttggttgttactaaaactttccaaattctccccagatcaat 379
Query: 181 tctttcaattttatgtgaaaaactcacaatccagaagaaatatgaaaggaagacaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctttcaattttatgtgaaaaactcacaatccagaagaaatatgaaaggaagacaaataa 439
Query: 241 aatggaattaca-ttttttattctatatattttgccgtccaggcaaagtttta 292
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacggaattacaattttttattctatatattttgccgtccaggcaaagtttta 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
