Query= MSMg01no312_l19.b1 MSMg01no312_l19.b1 CHROMAT_FILE:
MSMg01no312_l19.b1 PHD_FILE: MSMg01no312_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:53 2005
(323 letters)
>mm_chr10_105304475_105305200
Length = 726
Score = 536 bits (277), Expect = e-157
Identities = 310/323 (95%), Gaps = 5/323 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaaatatttacttatttaggtgttttcattgatcacagttactcctacacaacc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaatatttactcatttaggtgttttcattgatcacagttactcctacacaacc 264
Query: 65 aaaccttacctaaatattttcatgccttccatgcattactgaatttagggatgaacctag 124
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 265 aaaccttacctaaatattttcatgccttccatgtattgttgaatttagggatgaacctag 324
Query: 125 gtctttttttgaaaggg----agaaatttggggcataaatttagtttatgcatataacaa 180
||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 325 gtctttttttgaaagggagaaagaaatttggggcataaatttggtttatgaatataacaa 384
Query: 181 tacaagtaacatgaaattgatataacatggcatatatttgatgtgactcctacttattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacaagtaacatgaaattgatataacatggcatatatttgatgtgactcctacttattat 444
Query: 241 ttttttaaagaccaaagctatggaaaattgcaaatgactgtacaatggtaagtgcatgtt 300
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 445 ttttttaaagaccaaagctatgaaaaattgcaaatgactgtacaatagtaagtgcatgtt 504
Query: 301 attttttaaccatccatttctta 323
|||||||| ||||||||||||||
Sbjct: 505 atttttta-ccatccatttctta 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 726
Length adjustment: 9
Effective length of query: 314
Effective length of database: 717
Effective search space: 225138
Effective search space used: 225138
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_l19.g1 MSMg01no312_l19.g1 CHROMAT_FILE:
MSMg01no312_l19.g1 PHD_FILE: MSMg01no312_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:53 2005
(118 letters)
>mm_chr10_105395185_105395702
Length = 518
Score = 215 bits (111), Expect = 9e-61
Identities = 117/119 (98%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 1 gcaacatttagcccatggcactttctgtctaatgccattagcttatttccctctgccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcaacatttagcccatggcactttctgtctaatgccattagcttatttccctctgccagt 259
Query: 61 agcaactccttctattaatatccttgtacccagcaggatatgaatta-atggcagagac 118
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 258 agcaactccttctattaatatccttgtacccagcaggatatgaattacatg-cagagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 518
Length adjustment: 8
Effective length of query: 110
Effective length of database: 510
Effective search space: 56100
Effective search space used: 56100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
