Query= MSMg01no317_b04.b1 MSMg01no317_b04.b1 CHROMAT_FILE:
MSMg01no317_b04.b1 PHD_FILE: MSMg01no317_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:00 2005
(630 letters)
>mm_chr10_6664735_6665764
Length = 1030
Score = 704 bits (364), Expect = 0.0
Identities = 397/408 (97%)
Strand = Plus / Minus
Query: 222 cctattgatctcgatcttacagcacaagccattgctgttctgttcaggaattttcccctg 281
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 cctattgatctcaatcttacagcacaagccattgctgttctgttcaggaattttcccctg 971
Query: 282 tgcccatatctttgaggcttttcccctctataagtttcagtgtctctggctttatatgga 341
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 970 tgcccatatctttgaggcttttcccctctataagtttcagtgtctctggttttatatgga 911
Query: 342 gttccttgatccacttagacttgagctttgtaccacgagataagaatggatcaattcaaa 401
||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||
Sbjct: 910 gttccttgatccacttagacttgagctttgtacaaggagataagaatggatcaatttgaa 851
Query: 402 ttcttctacatgataacaaccttctttttaatgatccatctgtagtcccaaatcatgact 461
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 850 ttcttctacatgataacaaccttctttttaatgatccatctgcagtcccaaatcatgact 791
Query: 462 aagatctgaatgtggtcctcattaccctgcctcagcctttgctgttctgacctctaacat 521
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aagatctgaacgtggtcctcattaccctgcctcagcctttgctgttctgacctctaacat 731
Query: 522 cctagattgtgcaccccaagaactatatagttctttatagtctccaaagggcatttgctt 581
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 730 cctagattgtgcaccccaagatctgtatagttctttatagtctccaaagggcatttgctt 671
Query: 582 tcctcttccttcctaccttggcaagtccctgggaactttgtgtctctt 629
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 670 tcctcttccttcctaccttggcaagtccctgggaactttgtgcctctt 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_b04.g1 MSMg01no317_b04.g1 CHROMAT_FILE:
MSMg01no317_b04.g1 PHD_FILE: MSMg01no317_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:00 2005
(628 letters)
>mm_chr10_6604837_6605865
Length = 1029
Score = 1145 bits (592), Expect = 0.0
Identities = 620/630 (98%), Gaps = 3/630 (0%)
Strand = Plus / Plus
Query: 1 aattaaacgttaaatctgacccagatttaaggcatcctactggttttgtatccaatgtgt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aattaaacgttaaatctgacccagacttaaggcatcctactggttttgtatccaatgtgt 260
Query: 61 attcagtttgtatccagagtgcccctaatccccaaaacaaccctcccgaggtgactgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcagtttgtatccagagtgcccctaatccccaaaacaaccctcccgaggtgactgggt 320
Query: 121 ttcctgagaagataaaatcgctgtcaaaataggtgcagtaagctctggccacctgagggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ttcctgagaagataaaatcgctgtcaaaataggtgcagtaagctctggccacctgaaggt 380
Query: 181 ggtacaaagagagcgccaagagccgccagagcttaatgaaattccagggttgcacaca-- 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtacaaagagagcgccaagagccgccagagcttaatgaaattccagggttgcacacaca 440
Query: 239 gtcagctttacacataccaatttcatacagcacatccaagcaatcagctacatcattgtt 298
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 gtcagctttacacataccaacttcatacaacacatccaagcaatcagctacatcattgtt 500
Query: 299 tctccggaacattgtgaaactgagcaagccaaccaccctctcctcactgggcgtcctgga 358
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcaggaacattgtgaaactgaggaagccaaccaccctctcctcactgggcgtcctgga 560
Query: 359 ctgtagagctctgagactccatgggggacacaaagagggggtctgctctagcagtcaccc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtagagctctgagactccatgggggacacaaagagggggtctgctctagcagtcaccc 620
Query: 419 cggggcctgctgcccgcccccccaacaaccttttcctctggccaacagtctacacagtcg 478
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 621 cggggcctgctgcccgcccccc-aacaaccttttcctctggccaacagtccacacagtcg 679
Query: 479 tagccagctaggtattaccgtgtgtccgggtgacggatggggcacagcttctagactccc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tagccagctaggtattaccgtgtgtccgggtgacggatggggcacagcttctagactccc 739
Query: 539 gggtcactcctataaagcgctgacttgctgatttgggggcgcccacgcgagtttctgccc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gggtcactcctataaagcgctgacttgctgatttgggggcgcccacgcgagtttctgccc 799
Query: 599 cacgcaggactgctcctagctggagcacac 628
||||||||||||||||||||||||||||||
Sbjct: 800 cacgcaggactgctcctagctggagcacac 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
