Query= MSMg01no319_f08.b1 MSMg01no319_f08.b1 CHROMAT_FILE:
MSMg01no319_f08.b1 PHD_FILE: MSMg01no319_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:39 2005
(372 letters)
>mm_chr10_123338636_123339407
Length = 772
Score = 696 bits (360), Expect = 0.0
Identities = 366/368 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggagtattcctctgaacctaggtctagcttgcacatggacaaatgattctgtc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaattcaggagtattcttctgaacctaggtctagcttgcacatggacaaatgattctgtc 513
Query: 65 agtctctggtgtctcgcaaaatctccagaccctaaatccaacattgaacttcaagttgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agtctctggtgtctcgcaaaatctccagaccctaaatccaacattgaacttcaagttgct 453
Query: 125 tttagcatgctaaaaatctgatcatgacagtgaacaggattgcttatcttcagagagggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttagcatgctaaaaatctgatcatgacagtgaacaggattgcttatcttcagagagggc 393
Query: 185 tatatggatcaagctaaggaaatgtctttttcttatatgacagaagtgtggcaatgttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tatatggatcaagctaaggaaatgtctttttcttatatgacagaagtgtggcaatgttgt 333
Query: 245 tttttgcccctgtttttagactatatacactctcccatatggtacaaaaattatctctgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttttgcccctgtttttagactatatacactctcccatatggtacaaaaattatctctgt 273
Query: 305 agtctagctttatgtatcatattgtctctagagcaccccttttattcttttgtggttttt 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 agtctagctttatgtatcatattgtctctagagtaccccttttattcttttgtggttttt 213
Query: 365 taactgtc 372
||||||||
Sbjct: 212 taactgtc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_f08.g1 MSMg01no319_f08.g1 CHROMAT_FILE:
MSMg01no319_f08.g1 PHD_FILE: MSMg01no319_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:39 2005
(342 letters)
>mm_chr10_123166612_123167353
Length = 742
Score = 596 bits (308), Expect = e-175
Identities = 332/340 (97%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 aacatcactctttgggtttttt-gctttgtgtagaaagtcttccaaactattcacaagaa 59
||||||||||||| | |||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 201 aacatcactcttt-gcttttttcggtttgtgtagaaagtcttccaaactattcacaagaa 259
Query: 60 aaatttacagtccctgtcgaaattgcttataaaagctgtttaagttagccccacttattg 119
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaatttacagtccccgtcaaaattgcttataaaagctgtttaagttagccccacttattg 319
Query: 120 tgtgtgttcctctgaaactcaacacactaagcatttataatcgtctgagagcaatagaga 179
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 320 tgtgtgttcctctgaaactcaacacactaagtatttataatcgtctgagagcaaaagaga 379
Query: 180 gctgctcccactgtgagctttgttggaagcaaagggctttattgtcttgttgtcccctta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctgctcccactgtgagctttgttggaagcaaagggctttattgtcttgttgtcccctta 439
Query: 240 tgcttgttaaaatgttccctttctctccggcgtttaatcctgtgatctgttgaacagtgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgcttgttaaaatgttccctttctctccggcgtttaatcctgtgatctgttgaacagtgg 499
Query: 300 agtacctgacatgtgtttgttccttaggcaaacgtgtaaa 339
||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agtacctgacatgtgtttgttccttaggcaaacgtgtaaa 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
