Query= MSMg01no319_p03.b1 MSMg01no319_p03.b1 CHROMAT_FILE:
MSMg01no319_p03.b1 PHD_FILE: MSMg01no319_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(322 letters)
>mm_chr10_99016718_99017439
Length = 722
Score = 586 bits (303), Expect = e-172
Identities = 315/323 (97%), Gaps = 8/323 (2%)
Strand = Plus / Minus
Query: 4 ggaattcagcaagc----attcccgttaagcgaaggagatctctgtcaatggaaccttga 59
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 522 ggaattcagcaagcaggga----cgttaagcgaaggagatctctgtcaatggaaccttga 467
Query: 60 tgggcacagagatctgggaaagggcaaggaaggcatctacataaatagatgctcctagat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgggcacagagatctgggaaagggcaaggaaggcatctacataaatagatgctcctagat 407
Query: 120 ttgatgagagctttgagcaagagagtcagaataatgacagataaagttggaaaaacacat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttgatgagagctttgagcaagagagtcagaataatgacagataaagttggaaaaacacat 347
Query: 180 tagggaaagaataacttgagtcatcacaggaagggcttcaagtaaaaactagtaaaaggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tagggaaagaataacttgagtcatcacaggaagggcttcaagtaaaaactagtaaaaggt 287
Query: 240 catctatttacaagccaaaggaagtcgatagagaaagtgatgatgttagcctttaatata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 catctatttacaagccaaaggaagtcgatagagaaagtgatgatgttagcctttaatata 227
Query: 300 atagaaaagtgtagccatatggt 322
|||||||||||||||||||||||
Sbjct: 226 atagaaaagtgtagccatatggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_p03.g1 MSMg01no319_p03.g1 CHROMAT_FILE:
MSMg01no319_p03.g1 PHD_FILE: MSMg01no319_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(293 letters)
>mm_chr10_98862794_98863486
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Plus
Query: 1 catcagttaaaagtgtgcccaaaactatggctctcggtaggcgtcttgctgctcactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcagttaaaagtgtgcccaaaactatggctctcggtaggcgtcttgctgctcactttc 260
Query: 61 ccttaaatgtatgccgtttgctatctctgtaatttttaggtgttagtcgtgtttttccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttaaatgtatgccgtttgctatctctgtaatttttaggtgttagtcgtgtttttccta 320
Query: 121 aaaatatttccctattaccttctgtgaggtgtaacggcaataaggttttcaatggggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatatttccctattaccttctgtgaggtgtaacggcaataaggttttcaatggggatg 380
Query: 181 gaaggccaaaggcagagggaacgtatatgatgtattaaactggttattgaagagatccag 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 gaaggccaaaggcagagggaacgtatatgatgtattaaactggttatcgaagagatccag 440
Query: 241 gtccagggccactgggaaagatttccaagttagagtggaacagtgaaatcaga 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccagggccactgggaaagatttccaagttagagtggaacagtgaaatcaga 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
