Query= MSMg01no322_l23.b1 MSMg01no322_l23.b1 CHROMAT_FILE:
MSMg01no322_l23.b1 PHD_FILE: MSMg01no322_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:47 2005
(510 letters)
>mm_chr10_120206979_120207887
Length = 909
Score = 928 bits (480), Expect = 0.0
Identities = 505/518 (97%), Gaps = 9/518 (1%)
Strand = Plus / Plus
Query: 1 tctcttgggtcctattgcttagtcactgtctgcattgatgtgtacttagacatccgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tctcttgggtcctattgcttagtcactgtctgcattgatgtgtacttagacatt-gtggg 259
Query: 61 agtctccgaagagcttctcattttctcttccctgtgtgtgacgtgctgggacaaaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtctccgaagagcttctcattttctcttccctgtgtgtgacgtgctgggacaaaatgca 319
Query: 121 gcttgcccccatcctagttcttagggacctgagggtgctgggcagtagagctgacaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcttgcccccatcctagttcttagggacctgagggtgctgggcagtagagctgacaaact 379
Query: 181 gccctcgagcagggaacttcagatggccccatccgaatctctcctctccccggggctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccctcgagcagggaacttcagatggccccatccgaatctctcctctccccggggctaga 439
Query: 241 ggaaaataaagccatttctgcatgctgaatgaggacaaggcttgctggaaatgttgttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaaataaagccatttctgcatgctgaatgaggacaaggcttgctggaaatgttgttta 499
Query: 301 acttttctaaatcaaacactgtgaatgatcaatgtatcagaacagaagactcacccgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 acttttctaaatcaaacactgtgaatgatcaatgtatcagaacagaagactcaggtgcag 559
Query: 361 acaatgccaagcaagaaacactcaattttcccaatactgttattttcaatgggttcaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acaatgccaagcaagaaacactcaattttcccaatactgttattttcaatgggttcaact 619
Query: 421 gggagtagataataaataaatggatggatggatagacagatggacagatggatggataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggagtagataataaataaatggatggatggatagacagatggacagatggatggataga 679
Query: 481 tagatagatagata--------agatagatggatggat 510
|||||||||||||| ||||||||||||||||
Sbjct: 680 tagatagatagatagatagataagatagatggatggat 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_l23.g1 MSMg01no322_l23.g1 CHROMAT_FILE:
MSMg01no322_l23.g1 PHD_FILE: MSMg01no322_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:47 2005
(344 letters)
>mm_chr10_120348214_120348957
Length = 744
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%)
Strand = Plus / Minus
Query: 1 ccgattggaagttagacattgaaagtcaatcctgatagctggatgtaaggatgaacacct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccgattggaagttagacattgaaagtcaatcctgatagctggatgtaaggatgaacaccg 439
Query: 61 gtaaaagcagcgactactgctgtaaatcgaagccaaagttttaggagaattctgtgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtaaaagcagcgactactgctgtaaatcgaagccaaagttttaggagaattctgtgtgga 379
Query: 121 ccgcttgttttctgccatctggggtagttgctgggaactgagtccttttgtctgagaaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 378 ccgcttgttttctgccatctggggtagttgctgggaactgagtccctttgtctgagaaag 319
Query: 181 agcccagaatattaaagtgcctagatagttctgcctttcagacagtatcaggatctgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agcccagaatattaaagtgcctagatagttctgcctttcagacagtatcaggatctgact 259
Query: 241 gagagacacaaacttagagttaaccaaatcatcaccagacaattgtttccatgaatgacg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 gagagacacaaacttagagttaaccaaatcatcaccagacaattgtttccatgaatgatg 199
Query: 301 atgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 340
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 198 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
