Query= MSMg01no326_f04.b1 MSMg01no326_f04.b1 CHROMAT_FILE:
MSMg01no326_f04.b1 PHD_FILE: MSMg01no326_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:01 2005
(536 letters)
>mm_chr10_115264638_115265574
Length = 937
Score = 988 bits (511), Expect = 0.0
Identities = 526/531 (99%), Gaps = 1/531 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcaaaggc-caatacattatctcattgaggataataattcctcccatatttt 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggaattctgcaaaggcaaaatacattatctcattgaggataataattcctcccatatttt 675
Query: 63 taaaatggattagggtaaatcagccttccagaggactggccccttggccaagtgatttgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 taaaatggattagggtaaatcagccttccagaggactggccccttggccaagtgatttgc 615
Query: 123 ctggcccaattgggttgactaactcgttcttgggtagcttataatggtagatctctaccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctggcccaattgggttgactaactcgttcttgggtagcttataatggtagatctctaccc 555
Query: 183 aggccagagaaatggttttcccttaatatgcatagatacttcagtagcacacccctctca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aggccagagaaatggttttcccttaatatgcatagatacttcagtagcacacccctctca 495
Query: 243 actctccagaaggacggtgccatgcaaggcacagaataagtaatttttgactttctaaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 actctccagaaggacggtgccatgcaaggcacagaataagtaatttttgactttctaaag 435
Query: 303 tagaagcccatgtaacatcacacataagagaggcatttaagaaaaatgttataggacatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tagaagcccatgtaacatcacacataagagaggcatttaagaaaaatgttataggacatt 375
Query: 363 tactttctgccactattgttgcctttgcttctcatgatggagataagagctgctttgtgt 422
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tactttctgtcattattgttgcctttgcttctcatgatggagataagagctgctttgtgt 315
Query: 423 atctatatttacctcttttccatctttgcttactctcacccatatggccagtcccaagat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atctatatttacctcttttccatctttgcttactctcacccatatggccagtcccaagat 255
Query: 483 cagtgtaccacatacctgtagaatagggaggggggaaaagaaagaacatta 533
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 254 cagtgtaccacatacctgtagaaaagggaggggggaaaagaaagaacatta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_f04.g1 MSMg01no326_f04.g1 CHROMAT_FILE:
MSMg01no326_f04.g1 PHD_FILE: MSMg01no326_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:01 2005
(543 letters)
>mm_chr10_115101372_115102313
Length = 942
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%), Gaps = 1/543 (0%)
Strand = Plus / Plus
Query: 1 tctgtttaggaaataaaaggttttgtttatcgcctcagtgcctggtgcacacggaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtttaggaaataaaaggttttgtttatcgcctcagtgcctggtgcacacggaagctc 260
Query: 61 agtaaacacgagtcggtgtgccggctcgttttaatcagtggcgcttgtccagcccggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaaacacgagtcggtgtgccggctcgttttaatcagtggcgcttgtccagcccggatg 320
Query: 121 tcagcagtgctgtggaaccgcacattgttacggtgcacgccactcacggtctagaaacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagcagtgctgtggaaccgcacattgttacggtgcacgccactcacggtctagaaacgc 380
Query: 181 tttcacattctgatgtgtgtaatgaggcatgcgttgtctagctgacacatggttttcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcacattctgatgtgtgtaatgaggcatgcgttgtctagctgacacatggttttcccg 440
Query: 241 ctacttcaaaaccagaaacagtcgctttagtttgtggctttgtgagaaggacacttttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacttcaaaaccagaaacagtcgctttagtttgtggctttgtgagaaggacacttttgt 500
Query: 301 gtctgaacatcagactcttgtcttcaaagcttggaaatgcccgcgcctcccagacagctg 360
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 gtctgaacatcagactcttgtcttcaaagcttggaaatgcccgtggttcccagacagctg 560
Query: 361 cgggggctcatggagggagtaaataggacgcagtggctgccgcttcattttttgatgaag 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgggg-ctcatggagggagtaaataggacgcagtggctgccgcttcattttttgatgaag 619
Query: 421 atcaaaaggatggaaagggaatctgcccactactgagaaaaagaatttggagtctgtgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcaaaaggatggaaagggaatctgcccactactgagaaaaagaatttggagtctgtgtg 679
Query: 481 actgtcattaaagtgctgtcagaatgtttttctgagaaaagagtaatctggttcaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 actgtcattaaagtgctgtcagaatgtttttctgagaaaagagtaatctggttcaagagt 739
Query: 541 tcc 543
|||
Sbjct: 740 tcc 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space: 496756
Effective search space used: 496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
