Query= MSMg01no328_l05.b1 MSMg01no328_l05.b1 CHROMAT_FILE:
MSMg01no328_l05.b1 PHD_FILE: MSMg01no328_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:55 2005
(363 letters)
>mm_chr12_70623205_70623967
Length = 763
Score = 640 bits (331), Expect = 0.0
Identities = 352/359 (98%)
Strand = Plus / Plus
Query: 5 gaattcacgcatttacctctgtgggcttgggtcattgagagcacatggttcctcggctca 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgcatttaggtctgtgggcttgggtcattgagagcacatggttcctcggctca 264
Query: 65 gtctctagtaccacaaacactaaaacagaacaacaaacaacaaatacctgctgggttcac 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtctctagtaccacaaacacttaaacagaacaacaaacaacaaatacctgctgggttcac 324
Query: 125 acatgcgccaggcacagccaggctaagccttggaagctctgttatcttctggaaatagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acatgcgccaggcacagccaggctaagccttggaagctctgttatcttctggaaatagaa 384
Query: 185 ggatgtttccatcggttgttgctgctgcatagacacatttctaaactttgtgacgccaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggatgtttccatcggttgttgctgctgcatagacacatttctaaactttgtgacgccaag 444
Query: 245 cagtaaaatggtatttagcctgacagttgactgtcatgatttgggtcagggatggctgga 304
||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 445 cagtaaaatggtatttagcctgaaagttgactgtcaggctttgggtcagggatggctgga 504
Query: 305 cagttggctgctttgggtaacagctgggttcgttctctcggctgtagtaggttggtaag 363
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 cagttggctgctttgggtaacagttgggttcgttctctcggctgtagtaggttggtaag 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_l05.g1 MSMg01no328_l05.g1 CHROMAT_FILE:
MSMg01no328_l05.g1 PHD_FILE: MSMg01no328_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:55 2005
(326 letters)
>mm_chr10_78090682_78091407
Length = 726
Score = 456 bits (236), Expect = e-133
Identities = 311/354 (87%), Gaps = 30/354 (8%)
Strand = Plus / Minus
Query: 1 ctataagctttgtgaggacatttctccatttttggttaatatctaacttggaggcattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctataagctttgtgaggacatttctccatttttggttaatatctaacttggaggcattca 336
Query: 61 cttttgtaaaccgcgaaagtgccttatatccttcctatatacttcattaacgtggtaagt 120
|||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||| |||
Sbjct: 335 cttttgtaaacctcgaaagtgccttatatccttcatatttacttcattaatgtggtgagt 276
Query: 121 cagtgccaagtgccatactgtgtgtgcacgtgcgcatgtgtgggtagtgccacattgtta 180
| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 275 cggtgccaagtgccatactgtgtgtgcacatgcgcatgtgtgggtagtgccatattgtta 216
Query: 181 ctgtgtatactatatatgtgtg--cgcatgtgtgtatgtgtgtgtgtg------------ 226
||||||||||||||| |||||| || ||||||| ||||||||||||
Sbjct: 215 ctgtgtatactatatgtgtgtgttcg--tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 158
Query: 227 --------------aagtaccatattatattactgtgtacatgtatgtatgtgtgtgcgt 272
|||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 157 tgtgtgtgtgtgtgaagtaccatattatattactgtgtacgtgtatgtatgtgtgtgtat 98
Query: 273 gcgtgtgctcgcatgtgtgtcttagctagtgaagtgtgtcttacaactcagaaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gcgtgtgctcgcatgtgtgtcttagctagtgaagtgtgtcttacaactcagaaa 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
