Query= MSMg01no336_b03.b1 MSMg01no336_b03.b1 CHROMAT_FILE:
MSMg01no336_b03.b1 PHD_FILE: MSMg01no336_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:02 2005
(184 letters)
>mm_chr10_80694304_80694887
Length = 584
Score = 339 bits (175), Expect = 9e-98
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 5 gaattcagccagtggccaggggtagagctctgcctagtatggcaagcaagggtcctgggg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagccagtggtcaggggtagagctctgcctagtatggcaagcaagggtcctgggg 264
Query: 65 aaaatggagactaagctacaatttgatttagcagctgagaactgcagttgatttccagac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaatggagactaagctacaatttgatttagcagctgagaactgcagttgatttccagac 324
Query: 125 gttaccagaagtaaaagagagcagagaaggatgtccccagtgtccataaagaactaatc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttaccagaagtaaaagagagcagagaaggatgtccccagtgtccataaagaactaatc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no336_b03.g1 MSMg01no336_b03.g1 CHROMAT_FILE:
MSMg01no336_b03.g1 PHD_FILE: MSMg01no336_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:03 2005
(561 letters)
>mm_chr10_80887466_80888424
Length = 959
Score = 1044 bits (540), Expect = 0.0
Identities = 556/562 (98%), Gaps = 4/562 (0%)
Strand = Plus / Minus
Query: 1 cccgtcctggccttctggaggcctccatccaggctgctgctgggagctgggggcgggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cccgtcctggccttctggaggcctccatccaggctgctgctgggagctgggggcgggggc 700
Query: 61 aaccccagtgctggctccagccctgaggacttagtgtggccttggcctcagtttccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aaccccagtgctggctccagccctgaggacttagtgtggccttggcctcagtttccccca 640
Query: 121 taggagggtgtgggtcgatctggcaggaaggatgccacccctgtgatctcccactcaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 taggagggtgtgggtcgatctggcaggaaggatgccacccctgtgatctcccactcaccc 580
Query: 181 cctcctaccctgagggaatcccccatgggatctcaagagtcccctgaattccaagtgtgg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cctcctaccctgagggagtcccccatgggatctcaagagtcccctgaattccaagtgtgg 520
Query: 241 tctctccagctccacacaagcccaggctggacagaaggacccaaggagcaacgctgcagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tctctccagctccacacaagcccaggctggacagaaggacccaaggagcaacgctgcag- 461
Query: 301 ccccccaacctctccgccctg-cccccccccacatgtcactcatggtgtctgccttgacc 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccccccaacctctccgccctgccccccccccacatgtcactcatggtgtctgccttgacc 401
Query: 360 tgtctctctgtctctgtctctctgtctctcttcacccgtccctcccaaatcggctaattt 419
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 400 tg--tctctgtctctgtctctctgtctctcttcacccgtccctcctaaatcggctaattt 343
Query: 420 tacagccagggttcagactgaaataactcctttgctgatccaaccggatcctaccgggag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tacagccagggttcagactgaaataactcctttgctgatccaaccggatcctaccgggag 283
Query: 480 cctggcccggggcggggttggccctgatgtcagtgtccatgccagggcaccaggtgccca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctggcccggggcggggttggccctgatgtcagtgtccatgccagggcaccaggtgccca 223
Query: 540 agagaattctgggagctccatg 561
||||||||||||||||||||||
Sbjct: 222 agagaattctgggagctccatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 959
Length adjustment: 10
Effective length of query: 551
Effective length of database: 949
Effective search space: 522899
Effective search space used: 522899
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
