Query= MSMg01no337_l17.b1 MSMg01no337_l17.b1 CHROMAT_FILE:
MSMg01no337_l17.b1 PHD_FILE: MSMg01no337_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:12 2005
(649 letters)
>mm_chr10_65215896_65216944
Length = 1049
Score = 1239 bits (641), Expect = 0.0
Identities = 644/645 (99%)
Strand = Plus / Plus
Query: 5 gaattctccttcactgtctctcatctcttttctagcacttttgatctttaggctacattt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccttcacagtctctcatctcttttctagcacttttgatctttaggctacattt 264
Query: 65 tgtgcagagtccatatttaattttacctttgcaccaccagggcctaattcttatgaatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgcagagtccatatttaattttacctttgcaccaccagggcctaattcttatgaatgg 324
Query: 125 aacctgtagactgtcaagccttctgtggtcttgctggttaaaaacaagagagcatttgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacctgtagactgtcaagccttctgtggtcttgctggttaaaaacaagagagcatttgat 384
Query: 185 gctgttcccacattggatgatatctcacccagtaaatccctgtttctacattccattttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgttcccacattggatgatatctcacccagtaaatccctgtttctacattccattttt 444
Query: 245 gtgacatcaccagtgagaagccctgaaaatttctaagcctaccaagagagcctagtctaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgacatcaccagtgagaagccctgaaaatttctaagcctaccaagagagcctagtctaa 504
Query: 305 ggcagatgcaatgaatcacaagataaaagagaatcatgaccacccacttacaaagtataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcagatgcaatgaatcacaagataaaagagaatcatgaccacccacttacaaagtataa 564
Query: 365 agtatccatgcatttcttagaaaggaatgaggaaggacaagtaacaaaaataaatcagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtatccatgcatttcttagaaaggaatgaggaaggacaagtaacaaaaataaatcagat 624
Query: 425 aaaggctaaatatgaacttgcaggagataaaatacaagtgatgccgacctcagaaatgtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaggctaaatatgaacttgcaggagataaaatacaagtgatgccgacctcagaaatgtg 684
Query: 485 agcctcacagactcagggccctgtaagttaatagactccatatctaacaagatgtctgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcctcacagactcagggccctgtaagttaatagactccatatctaacaagatgtctgtg 744
Query: 545 aaatgcaaatgcctaacaatttcaactgatgggcaacaaataggtccaacttccctcact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaatgcaaatgcctaacaatttcaactgatgggcaacaaataggtccaacttccctcact 804
Query: 605 tacaggttgtaaaaccacaaatttgtaaatatgttttgaaattaa 649
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tacaggttgtaaaaccacaaatttgtaaatatgttttgaaattaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_l17.g1 MSMg01no337_l17.g1 CHROMAT_FILE:
MSMg01no337_l17.g1 PHD_FILE: MSMg01no337_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:12 2005
(454 letters)
>mm_chr10_65374594_65375447
Length = 854
Score = 775 bits (401), Expect = 0.0
Identities = 411/415 (99%), Gaps = 2/415 (0%)
Strand = Plus / Minus
Query: 1 atctcatatgttttgcttttatgtgatattattagtataatactttaagtgaatttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atctcatatgttttgcttttatgtgatattattagtataatactttaagtgaatttaaat 357
Query: 61 ctttttcctttcagatgtaattatccagggtactatattttattagtaaatcagaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctttttcctttcagatgtaattatccagggtactatattttattagtaaatcagaaaaaa 297
Query: 121 atatttcaggcatatagggatacataagaacttgtttctatactttcaaagtcaactact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atatttcaggcatatagggatacataagaacttgtttctatactttcaaagtcaactact 237
Query: 181 catattctgaagttatataacaaaaacaagtctgagatatatgtttgtaatatatgtatg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 236 catattctgaagttatataacaaaaacaagtctgagatatatgtctgtaatatatgtatg 177
Query: 241 agtatgcatatatctg--tatatatataacatgtactatatatttgtgtgtatatatgca 298
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 agtatgcatatatctgtatatatatataacatgtactatatatttgtgtgtatatatgca 117
Query: 299 tatttatttgtatatatatgtgtatatattcacatgggcacaatatatgcaaatattttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tatttatttgtatatatatgtgtatatattcacatgggcacaatatatgcaaatattttt 57
Query: 359 cgatattatttattcaataattttcatgtttgtttgaaaaaattgatagttacaa 413
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 cgatattatttattgaataattttcatgtttgtttgaaaaaattgatagttacaa 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
