Query= MSMg01no338_e04.b1 MSMg01no338_e04.b1 CHROMAT_FILE:
MSMg01no338_e04.b1 PHD_FILE: MSMg01no338_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:51 2005
(580 letters)
>mm_chr10_75600702_75601681
Length = 980
Score = 986 bits (510), Expect = 0.0
Identities = 553/576 (96%), Gaps = 14/576 (2%)
Strand = Plus / Plus
Query: 5 gaattccaggatttgcttattgctccaaagaacacaaatggagcaaggtacagagcccag 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggaagtgattattgctccaaagaacacaaatggagcaaggtacagagcccag 264
Query: 65 aagtgactgggtagtctgggaccttgactaacagagttccactgactctcctcactgata 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 aagtgactgggtagtctgggaccttgactaacagagttctactgactctcctcactgata 324
Query: 125 cacacaaatgtattcaggataaaaggaatacaatccacaaactcaacgttgtgtgaacgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacacaaatgtattcaggataaaaggaatacaatccacaaactcaacgttgtgtgaacgt 384
Query: 185 catcctaccctgtactgggaggcctggaaccattactaatgcatggaaggaactcaagtg 244
|||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 catcctac--------------cctggaaccattactgatgcatggaaggaactcaagtg 430
Query: 245 tgaagctctcacaatgattcaagtccatcatctttgctcgtaaagatttttcagcaacat 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 431 tgaagctctcacaatgattcaagtccatcatctttgctcataaagatttttcagcaacat 490
Query: 305 cacctgtcaggattctagctctccaattctcaaagtcttcaggaagccaagggtttcatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cacctgtcaggattctagctctccaattctcaaagtcttcaggaagccaagggtttcatc 550
Query: 365 ccccaatgggatgaaatactgggtcactctcagattactagaggaaatgaactatgatct 424
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 551 ccccaatgggatgaaatactgggtcactctcagattactagaggaaattaactatgatct 610
Query: 425 tgtaacctgcctaaacaagctatcttctgacataccagaaagaagagggcgttagatctc 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 611 tgtaacctgcctaaacaagctatcttctgacataccagaaagaagagggtgttagatctc 670
Query: 485 attacagatggtcgtgagccaccctgtgcttgctgggaattaactcaggacctctggaaa 544
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 attacagatggtcgtgagctaccctgtgcttgctgggaattaactcaggacctctggaaa 730
Query: 545 agcagtcagtgctcttaactgctgagccatctctcc 580
||||||||||||||||||||||||||||||||||||
Sbjct: 731 agcagtcagtgctcttaactgctgagccatctctcc 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_e04.g1 MSMg01no338_e04.g1 CHROMAT_FILE:
MSMg01no338_e04.g1 PHD_FILE: MSMg01no338_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:51 2005
(365 letters)
>mm_chr10_75742969_75743735
Length = 767
Score = 652 bits (337), Expect = 0.0
Identities = 359/367 (97%), Gaps = 2/367 (0%)
Strand = Plus / Minus
Query: 1 cacatttctgaaacgaagcagcgctttctggaagggacgctccacccatgtaacgtgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cacatttctgaaacgaagcagcgctttctggaagggacgctccacccatgtaacgtgttg 508
Query: 61 atgtgccctcacacgtgcgttaccaaccttcccaagcctcgccagaaacagccaggttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atgtgccctcacacgtgcgttaccaaccttcccaagcctcgccagaaacagccaggttag 448
Query: 121 tacctaacagcgaggcctcctggccttgacgggctggctgcagtgggtgtagctgcattg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tacctaacagcgaggccgcctggccttgacgggctggctgcagtgggtgtagctgcattg 388
Query: 181 gatcttgcaggagtcagtacccccacctccttgggcctggggttgagttaaggatcagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatcttgcaggagtcagtacccccacctccttgggcctggggttgagttaaggatcagac 328
Query: 241 tgggtgtgtttatttg--cctggttcacgaaatgggatgctgctggtgcagctgcctgtt 298
||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgggtgtgtgcacctgctcctggctcacgaaatgggatgctgctggtgcagctgcctgtt 268
Query: 299 ggtacccacctgcctcctggtaatcagttttaatgatacattcaagggtacattaatgtc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtacccacctgcctcctggtaatcagttttaatgatacattcaagggtacattaatgtc 208
Query: 359 tgcaagg 365
|||||||
Sbjct: 207 tgcaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 767
Length adjustment: 9
Effective length of query: 356
Effective length of database: 758
Effective search space: 269848
Effective search space used: 269848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|