Query= MSMg01no338_i20.b1 MSMg01no338_i20.b1 CHROMAT_FILE:
MSMg01no338_i20.b1 PHD_FILE: MSMg01no338_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:12 2005
(610 letters)
>mm_chr10_103555915_103556924
Length = 1010
Score = 1149 bits (594), Expect = 0.0
Identities = 603/606 (99%)
Strand = Plus / Minus
Query: 5 gaattctctgggttttcagatataacacacgaatcacttagatttcatcctatgaaaata 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattctctgggttttcagatgtaacacacgaatcacttagatttcatcctatgaaaata 751
Query: 65 gaaataaaagaggaacaggaatggtagaaaggtaacaggacaaaaaaaattccttgtgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gaaataaaagaggaacaggaatggtagaaaggtaacaggacaaaaaaaattccttgtgat 691
Query: 125 ttcaaagagcaaataaagatatctgtgaaataatagaatgtgcttaacaacaaaggaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ttcaaagagcaaataaagatatctgtgaaataatagaatgtgcttaacaacaaaggaaac 631
Query: 185 attaaatttaatagcttttcctttattacactaattattccaggtaaaaagggaatatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 attaaatttaatagcttttcctttattacactaattattccaggtaaaaagggaatatgg 571
Query: 245 gtttccaacttagcaggaaaatgctatttgatttaatcataatactttgcatatcttatt 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtttccatcttagcaggaaaatgctatttgatttaatcataatactttgcatatcttatt 511
Query: 305 tcatctgagtagcagtagtttagtccaatgacttcaaaggttgtttaggtcatgaatatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcatctgagtagcagtagtttagtccaatgacttcaaaggttgtttaggtcatgaatatg 451
Query: 365 aaccagagttctggacctgaaataagaataacaagtctagatacttaggctattgctcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaccagagttctggacctgaaataagaataacaagtctagatacttaggctattgctcaa 391
Query: 425 gaaagtccacagggacaagcctctcttgtcactgattcatgaacataattcatgagtatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaaagtccacagggacaagcctctcttgtcactgattcatgaacataattcatgagtatc 331
Query: 485 ctaaaattaataaatatactcaaggattatttgaatggtaaatgtttctctgaaatttat 544
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 330 ctaaaattaataaatatactcaaggattatttgaatggtaaatgtttctccgaaatttat 271
Query: 545 aattctcaatatagcaataataacaaaaataaagaaataatatactaactggaataaagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aattctcaatatagcaataataacaaaaataaagaaataatatactaactggaataaagg 211
Query: 605 aacaat 610
||||||
Sbjct: 210 aacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_i20.g1 MSMg01no338_i20.g1 CHROMAT_FILE:
MSMg01no338_i20.g1 PHD_FILE: MSMg01no338_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:12 2005
(530 letters)
>mm_chr10_103416911_103417840
Length = 930
Score = 965 bits (499), Expect = 0.0
Identities = 520/533 (97%), Gaps = 11/533 (2%)
Strand = Plus / Plus
Query: 1 acttgtatgagaagagttaatgtttgatataggcagcaaagataacatgtattttcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgtatgagaagagttaatgtttgatataggcagcaaagataacatgtattttcatat 260
Query: 61 gaaaagtaaatcttatctgtgattacatattcttcacaaacaggttatttctcaatgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaagtaaatcttatctgtgattacatattcttcacaaacaggttatttctcaatgtgc 320
Query: 121 aggaatcctgactttgctaaaattgttttcagatatgttatcacacagttaaattctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaatcctgactttgctaaaattgttttcagatatgttatcacacagttaaattctctc 380
Query: 181 tctctctctctctctctctctctctctctctctctctctctctctctctctctctccttt 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tctctctctctctctctctctctctctctctctctctctctctctctc--------cttt 432
Query: 241 ctattttataagacatggtttccctgtgtagccctggctctcctggaattcactctggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctattttataagacatggtttccctgtgtagccctggctctcctggaattcactctggag 492
Query: 301 atcaggttggcctcaagctcagaaatccacctccctctgcctcccaattgctgggatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atcaggttggcctcaagctcagaaatccacctccctctgcctcccaattgctgggatgaa 552
Query: 361 tgtcatgcaccacgactgcctggcttagttaatttatttctaaagctggaacatattcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 553 tgtcatgcaccacgactgcctggcttagttaatttatttctaaagctggaacatatttgc 612
Query: 421 tgaattctcatatacttctgatgaaccatttttttttt---attgtcaggaccagattct 477
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 613 tgaattctcatatacttctgatgaaccatttttttttttttattgtcaggaccagattct 672
Query: 478 tagggagttgtatttcctttctgtgagttgatgtaggaatgttgaaaaagaaa 530
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 673 tagggagttgtatttcctttctgtgagttgatgtaggaatgatgaaaaagaaa 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 106
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
