Query= MSMg01no339_g19.b1 MSMg01no339_g19.b1 CHROMAT_FILE:
MSMg01no339_g19.b1 PHD_FILE: MSMg01no339_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:15 2005
(557 letters)
>mm_chr10_61649459_61650414
Length = 956
Score = 971 bits (502), Expect = 0.0
Identities = 541/554 (97%), Gaps = 1/554 (0%)
Strand = Plus / Plus
Query: 4 ggaattccctaactttggcttagctgggtctgagattcttgttttatatctattgccctg 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctaacccaggcttagctgggtctgagattcttgttttatatctattgccctg 263
Query: 64 tctaagactctcacagaaaaacccagaaacccaggtagggttgggatgacacttggtccg 123
||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 264 tctaaaactctcacagaaaaacctagaaacccaggtagggttggggtgacacttggaccg 323
Query: 124 actgctcctgcaaggccggatgtctccagcagggggcggcaagcaccaagctttgtttgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actgctcctgcaaggccggatgtctccagcagggggcggcaagcaccaagctttgtttgg 383
Query: 184 catgggtccctacagagccctacctcggttactttctataacacgggtagacttgtgaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 384 catgggtccctacagagccctacctcggttactttctataacacgggtagacttgtg-at 442
Query: 244 accattctcctacgggagccctggactcagctacttctccatgtaaccatggactcttaa 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accattctcctacaggagccctggactcagctacttctccatgtaaccatggactcttaa 502
Query: 304 gtcttactattagtttcccatagagtgtgaaatacgaatgctgtccattctttcttcctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 gtcttactattagtttcccatagagtgtgaaatacgaatgctgtccattctttctccctg 562
Query: 364 acctcagcgccccaagttataccaatcttcactccggggcagccttctctcaatctgaca 423
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 563 accccagcgccccaagttataccaatcttcaccccggggcagccttctctcaatctgaca 622
Query: 424 agagacttccaaacaacacaaataaaagaccaccccccaaaacacatctttattgttcaa 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 623 agagacttccaaacaacacaaataaaagaccaccccccaaaacacatatttattgttcaa 682
Query: 484 ttaatgaactaacggggaggggtgagtggactcggtcaggggtggctagttttgaatagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaatgaactaacggggaggggtgagtggactcggtcaggggtggctagttttgaatagc 742
Query: 544 cagaaactcttgtt 557
||||||||||||||
Sbjct: 743 cagaaactcttgtt 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 956
Length adjustment: 10
Effective length of query: 547
Effective length of database: 946
Effective search space: 517462
Effective search space used: 517462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_g19.g1 MSMg01no339_g19.g1 CHROMAT_FILE:
MSMg01no339_g19.g1 PHD_FILE: MSMg01no339_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:15 2005
(434 letters)
>mm_chr10_61811756_61812589
Length = 834
Score = 806 bits (417), Expect = 0.0
Identities = 433/445 (97%), Gaps = 11/445 (2%)
Strand = Plus / Minus
Query: 1 agctaaaaacagaaacattgattcgtcagaccaaaggagaagtggttatcttgggatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctaaaaacagaaacattgattcgtcagaccaaaggagaagtggttatcttgggatgtg 422
Query: 61 gccggcctagcgacaccacgctggcgcctgtgtgatacatattcaagtaggatttgttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccggcctagcgacaccacgctggcgcctgtgtgatacatattcaagtaggatttgttca 362
Query: 121 ctatctgtctccctaaatgtggtcagacacggtgtcttgtccattgccagatttggggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctatctgtctccctaaatgtggtcagacacggtgtcttgtccattgccagatttggggtg 302
Query: 181 atgggggaaatagagagtagagagtatctcatatttattgaggtgaaaaaacgacgccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgggggaaatagagagtagagagtatctcatatttattgaggtgaaaaaacgacgccgt 242
Query: 241 gggggtcttgagaaatagcagggttctttctctgttctacatttggttttatgagacggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggggtcttgagaaatagcagggttctttctctgttctacatttggttttatgagacggg 182
Query: 301 ttctagacatgaagcccaggctggccttgatgtgtctgattgtggcatctgagtgctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctagacatgaagcccaggctggccttgatgtgtctgattgtggcatctgagtgctggg 122
Query: 361 attacagaatgagccacctgagctgatacaagtatattaaat-----------actgcag 409
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 attacagaatgagccacctgagctgatacaagtatattaaataataaatgaccactgcag 62
Query: 410 tgggagggaccgtgttttcagtgtc 434
||||||| |||||||||||||||||
Sbjct: 61 tgggaggcaccgtgttttcagtgtc 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
