Query= MSMg01no344_i15.b1 MSMg01no344_i15.b1 CHROMAT_FILE:
MSMg01no344_i15.b1 PHD_FILE: MSMg01no344_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:45 2005
(487 letters)
>mm_chr10_52795192_52796078
Length = 887
Score = 600 bits (310), Expect = e-175
Identities = 316/318 (99%)
Strand = Plus / Plus
Query: 170 ataaaacatttcataggttttgaagatgattttcaggagataattaaaagtttatgcttt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataaaacatttcataggttttgaagatgattttcaggagataattaaaagtttatgcttt 429
Query: 230 ctcccagggagtagggtataatttaaaagaagttccaagcaaaggacaaatgttatgatt 289
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctcccagggagtaggatataatttaaaagaagttccaagcaaaggacaaatgttatgatt 489
Query: 290 tgatacacttctagtggggtatgtttacttattagtgacagctgctaagaaatttctatt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgatacacttctagtggggtatgtttacttattagtgacagctgctaagaaatttctatt 549
Query: 350 ttaaaattggagttttcccaaggaactgaaggggtctgcaaccctataggtgcaacaaca 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttaaaattggagttttcccaaggaactgaaggggtctgcaaccctataggtgcaacaaca 609
Query: 410 atatgaactaaccagtacgcccagagctcgtgtctctagctgcatatgtagcagaagatg 469
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 610 atatgaactaaccagtacgcccagagctcatgtctctagctgcatatgtagcagaagatg 669
Query: 470 gcctagtcggccatcatt 487
||||||||||||||||||
Sbjct: 670 gcctagtcggccatcatt 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i15.g1 MSMg01no344_i15.g1 CHROMAT_FILE:
MSMg01no344_i15.g1 PHD_FILE: MSMg01no344_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:45 2005
(527 letters)
>mm_chr10_52933150_52934075
Length = 926
Score = 803 bits (415), Expect = 0.0
Identities = 442/451 (98%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 1 aacatgaaaatttacaagcaaaaaaaaaatcatgattagaaatctagatctcacagcaat 60
|||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 450 aacatgaaaattaacaagc-aaagaaaaatcatgattagaaatctagatctcacagcaat 392
Query: 61 ttggtggtctgcattcatcctgaatcacagacattgagcatctgctagtgcccagagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttggtggtctgcattcatcctgaatcacagacattgagcatctgctagtgcccagagata 332
Query: 121 agccaacacctacttctcatcagaaaacagtcatcttcagaggatgccatatctcagctc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agccaacacctacttctcatgagaaaacagtcatcttcagaggatgccatatctcagctc 272
Query: 181 cagattgtgatggtctgtgtggccacttacctaaaagtctacaacttagatctgatggat 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagattgtgatggtctgtgtggtcacttacctaaaagtctacaacttagatctgatggat 212
Query: 241 tatgcaataatcttgcatttttgtgttatttatacctaaccatctgaatgcctttctagg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 211 tatgcaataatcttgcatttttgtgttatttatacctaacaatctgaatgcctttctagg 152
Query: 301 atttttagagcatttggtagaatccgcttgctaaattctatgagaatatcatcaatgtaa 360
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 151 aattttagagcatttggtagaatccgctcactaaattctatgagaatatcatcaatgtaa 92
Query: 361 tggattatcccaatatcctcaggagagaagcaatgattaagatccctgtagtgaggattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tggattatcccaatatcctcaggagagaagcaatgattaagatccctgtagtgaggattt 32
Query: 421 gacatagatctggggaattgatatagaccaa 451
|||||||||||||||||||||||||||||||
Sbjct: 31 gacatagatctggggaattgatatagaccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
