Query= MSMg01no344_m20.b1 MSMg01no344_m20.b1 CHROMAT_FILE:
MSMg01no344_m20.b1 PHD_FILE: MSMg01no344_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:06 2005
(471 letters)
>mm_chr10_63215822_63216693
Length = 872
Score = 812 bits (420), Expect = 0.0
Identities = 456/468 (97%), Gaps = 1/468 (0%)
Strand = Plus / Minus
Query: 5 gaattctctccctttc-ccatacaatgtagcatgtgctgtgacagactgtagaaaagaaa 63
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 672 gaattctctccctttcaacatacaatgtagtttgtgctgtgacagactgtagaaaagaaa 613
Query: 64 cagggttaaaacgaatttcacagaacacacaccaggtcatgtctctggccccttttggct 123
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 612 cagggttaaaaagaatttcacagtacacacaccaggtcatgtctctggccccttttggct 553
Query: 124 acaaaataagttgatctgtcaaagtgttggtttcttcttttctaaatgctaatgtctact 183
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acataataagttgatctgtccaagtgttggtttcttcttttctaaatgctaatgtctact 493
Query: 184 tcataaaatatatgtataaagaaaatatggacatgtaataatatatgtacaatgattagg 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 492 tcataaaatatatgtataaagaaaatatggacatgtcataatatatgtacaatgattagg 433
Query: 244 ccactttgagctctccaaatatgatagttacagccatttgtagagcagctggaggtacca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccactttgagctctccaaatatgatagttacagccatttgtagagcagctggaggtacca 373
Query: 304 gagtggtccatatgataaaaaggaaagaccgaagataactgaccaaaagaaagaccaaaa 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gagtggtccatatggtaaaaaggaaagaccgaagataactgaccaaaagaaagaccaaaa 313
Query: 364 cggcaacctggacatgaaagatgagcaaccttgcatggtccactggtttttagtgagtct 423
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 312 cagcaacctggacatgaaagatgagcaaccttgcgtggtccactggtttttagtgagtct 253
Query: 424 tgacagcacttgcttacccactcatttataaagcttttctcttctccc 471
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgacagcacttgcttacccactcatttataaagcttttctcttctccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space: 397382
Effective search space used: 397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_m20.g1 MSMg01no344_m20.g1 CHROMAT_FILE:
MSMg01no344_m20.g1 PHD_FILE: MSMg01no344_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:06 2005
(343 letters)
>mm_chr10_63024785_63025530
Length = 746
Score = 623 bits (322), Expect = 0.0
Identities = 339/346 (97%), Gaps = 3/346 (0%)
Strand = Plus / Plus
Query: 1 ctaaggactagaaagttagtgacctggctaggtgagctgagagttgaattttgcaacagt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaggactagaaagttagtggcctggctaggtgagctgagagttgaattttgcaacagt 260
Query: 61 ctttcactattatgctgtgagtggaggacaaaataataatttgtttttggattacagtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttcactattatgctgtgagtggaggacaaaataataatttgtttttggattacagtgg 320
Query: 121 aagaattacttggagtcggcttaattaattgcaactgctcga---tttttttttttaaag 177
|||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 321 aagaattacttggagtcggcttaattaattgcaactgctcaatttttttttttttttaag 380
Query: 178 tttagcaaatggcgatctttgcaggatatcctagggtctctctgctttcctatcctgtgt 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagcaaatgtcgatctttgcaggatatcctagggtctctctgctttcctatcctgtgt 440
Query: 238 ccatgtgctcattcatcattgttctttaaagaaggatttattggtatttaaaaaaattat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatgtgctcattcatcattgttctttaaagaaggatttattggtatttaaaaaaattat 500
Query: 298 ttctatgcatttgtgagggtatgtttgcattcctgaagttgcccat 343
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctatgcatttgtgagggtatgtttgcattcctgaagttgcccat 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 746
Length adjustment: 9
Effective length of query: 334
Effective length of database: 737
Effective search space: 246158
Effective search space used: 246158
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
