Query= MSMg01no345_h04.b1 MSMg01no345_h04.b1 CHROMAT_FILE:
MSMg01no345_h04.b1 PHD_FILE: MSMg01no345_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:54 2005
(495 letters)
>mm_chr10_5826348_5827242
Length = 895
Score = 810 bits (419), Expect = 0.0
Identities = 428/431 (99%)
Strand = Plus / Minus
Query: 1 ctgatgcagaggccgtggagggatgctgcttactggcttgcttcctcaaggcttgctcag 60
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 886 ctgatgcagaggccgtggagggatgctgcttattggcttgcttcctcatggcttgctcag 827
Query: 61 cttgctttcttatagaatccaggaccaccagcccagggatggtaccacccactactggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cttgctttcttatagaatccaggaccaccagcccagggatggtaccacccactactggct 767
Query: 121 gggctgggactgtcccctttgatcataattgagaaaatatcttaagagatctcatggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gggctgggactgtcccctttgatcataattgagaaaatatcttaagagatctcatggagg 707
Query: 181 catttcctcagctgagaccccttcctctctgatgactctagcttgtgtcaagttgaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 catttcctcagctgagaccccttcctctctgatgactctagcttgtgtcaagttgaaaca 647
Query: 241 aacccagccagttcaggtaacattaattaatggtgtagatcagaataaaccacaacatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aacccagccagttcaggtaacattaattaatggtgtagatcagaataaaccacaacatgt 587
Query: 301 ctataagcttcaattctaggatcttttgctagcattatttgagattaattagtgtctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctataagcttcaattctaggatcttttgctagcattatttgagattaattagtgtctaaa 527
Query: 361 agggattatgtgatctaaaatacatttagatattcaaatacaattaattatcacatgata 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 526 agggattatgtgatctaaaataaatttagatattcaaatacaattaattatcacatgata 467
Query: 421 tgtttgtgcat 431
|||||||||||
Sbjct: 466 tgtttgtgcat 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_h04.g1 MSMg01no345_h04.g1 CHROMAT_FILE:
MSMg01no345_h04.g1 PHD_FILE: MSMg01no345_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:54 2005
(503 letters)
>mm_chr10_5642585_5643487
Length = 903
Score = 957 bits (495), Expect = 0.0
Identities = 501/503 (99%)
Strand = Plus / Plus
Query: 1 agtgcctgaacactcctcgcccctcgcacccttgccttgaatcaccacaacagctcccac 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgcctgaacactcctcacccctcgcacccttgccttgaatcaccacaacagctcccac 260
Query: 61 aagttacatttcatctgtgccttgaggacctcagagaagaaagtcacccaagatctccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagttacatttcatctgtgccttgaggacctcagagaagaaagtcacccaagatctccat 320
Query: 121 cttagagaaagctctcttcccaggtggaacatttttacccacgtgttcactcactctatg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttagagaaagctctcttaccaggtggaacatttttacccacgtgttcactcactctatg 380
Query: 181 aacatttttgagcacctgctgtatagtcatcatttaacactcaacttcctcacagacccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatttttgagcacctgctgtatagtcatcatttaacactcaacttcctcacagacccg 440
Query: 241 tttttcctctccatttcctgtcttggcaaatggtacttcatatacatcactgcacacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttcctctccatttcctgtcttggcaaatggtacttcatatacatcactgcacacatc 500
Query: 301 caaagaactcagtactctgtgccctggctctcttcctcagtcttgaactggctctatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaagaactcagtactctgtgccctggctctcttcctcagtcttgaactggctctatcac 560
Query: 361 aagcttttatttctcgttgctcaatctcttttgagtcctccttctgttctcacactcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcttttatttctcgttgctcaatctcttttgagtcctccttctgttctcacactcgct 620
Query: 421 atgatttccaggccactatcatcccttggaggtcactacctccattcctttgcttgaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgatttccaggccactatcatcccttggaggtcactacctccattcctttgcttgaatt 680
Query: 481 ccccatcccctgcactgaagaac 503
|||||||||||||||||||||||
Sbjct: 681 ccccatcccctgcactgaagaac 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
