Query= MSMg01no346_j06.b1 MSMg01no346_j06.b1 CHROMAT_FILE:
MSMg01no346_j06.b1 PHD_FILE: MSMg01no346_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:18 2005
(525 letters)
>mm_chr10_128900293_128901218
Length = 926
Score = 909 bits (470), Expect = 0.0
Identities = 509/522 (97%), Gaps = 1/522 (0%)
Strand = Plus / Minus
Query: 5 gaattccacttatcttcttcagagaagagttcaagagaaatagatgtttcagaccatttt 64
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 726 gaattccacttaacttcttcagagaagagctcaagagaaatagatgtttcagaccatttt 667
Query: 65 gggctaggcaccagactgttatattaaaagtgaacctaacaacaac-aacaaaaaaaaat 123
||||||||||||||||||||||||||||| |||| ||||||||||| || |||||||||
Sbjct: 666 gggctaggcaccagactgttatattaaaaatgaatctaacaacaacaaaaaaaaaaaaaa 607
Query: 124 caagaaaggaatgagcaaataccacaactgtaaatcattgcttgcatttagcattcacga 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caagaaaggaataagcaaataccacaactgtaaatcattgcttgcatttagcattcacga 547
Query: 184 gtctaaaagcaaccatgctgtagcatctttcagattaataatagtaaaacaagacaaaag 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtctaaaagcaaccatactgtagcatctttcagattaataatagtaaaacaagacaaaag 487
Query: 244 tgctcagcagcatagacacctgagagataaggacacatgggagaggacaataaacttcat 303
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgctcagcagcatagatgcctgagagataaggacacatgggagaggacaataaacttcat 427
Query: 304 tttgtctttatgtcattacaatatttgttcctcttagcatgtatcctcatttgcttctat 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 426 tttgtctttatgtcattacaatatttgttcctcttagcacgtatcctcatttgcttctat 367
Query: 364 aaagtactactttattaatcaaatccttgaaggcttgttttacttgttcatttctcaacg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaagtactactttattaatcaaatccttgaaggcttgttttacttgttcatttctcaacg 307
Query: 424 agtaaatgaaagggttcagcatgggagcaattgaagtattgagaacagccacccctttgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtaaatgaaagggttcagcatgggagcaattgaagtattgagaacagccacccctttgg 247
Query: 484 tcagtgatgctctttcatttgcagaaggtttgacatacatga 525
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 246 tcagtgatgccctttcatttgcagaaggtttgacatacatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space: 471740
Effective search space used: 471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_j06.g1 MSMg01no346_j06.g1 CHROMAT_FILE:
MSMg01no346_j06.g1 PHD_FILE: MSMg01no346_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:19 2005
(432 letters)
>mm_chr10_128690925_128691756
Length = 832
Score = 826 bits (427), Expect = 0.0
Identities = 430/431 (99%)
Strand = Plus / Plus
Query: 1 caaaaggactccttgcatgaggacacagaccctgaaatacttgaatgttgctatattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaaggactccttgcatgaggacacagaccctgaaatacttgaatgttgctatattttt 260
Query: 61 aataagttacagagttctttattacatatgtcaaaaatcccttaaagcaggaacagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataagttacagagttctttattacatatgtcaaaaatcccttaaagcaggaacagaaat 320
Query: 121 atttattctgtataagatattatttagctcctatccatgtacagtgtcttagttactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttattctgtataagatattatttagctcctatccatgtacagtgtcttagttactgtt 380
Query: 181 ctatatctgtgaggagacttcatgaccaaggcaacttatagcccaaatcattaaataggg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 ctatatctgtgaggagacttcatgactaaggcaacttatagcccaaatcattaaataggg 440
Query: 241 tgtctagttacagtttcagaggttttggtcatgatcattatggcaagagaatggtggcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtctagttacagtttcagaggttttggtcatgatcattatggcaagagaatggtggcaa 500
Query: 301 gtaagcaggcatggtgttgtagaagttgctaagcacactcacatctgatctgaaatatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaagcaggcatggtgttgtagaagttgctaagcacactcacatctgatctgaaatatgc 560
Query: 361 tgggagagagagagagagagagagagagagagagagagagagagagagagagagagagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggagagagagagagagagagagagagagagagagagagagagagagagagagagagag 620
Query: 421 agagagagaga 431
|||||||||||
Sbjct: 621 agagagagaga 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 42
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
