Query= MSMg01no347_b19.b1 MSMg01no347_b19.b1 CHROMAT_FILE:
MSMg01no347_b19.b1 PHD_FILE: MSMg01no347_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:59 2005
(487 letters)
>mm_chr10_122460900_122461786
Length = 887
Score = 903 bits (467), Expect = 0.0
Identities = 479/483 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtgatggctaataataaaatacaacactacaatgattaaattatgattggttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgatggctaataataaaatacaacactacaatgattaaattatgattggttt 264
Query: 65 gtacatgtaaagttagcaggaaatacagtagaccctattatcatgagacaaatctttctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtacatgtaaagttagcaggaaatacagtagaccctattatcatgagacaaatctttctg 324
Query: 125 agactctaaatcaactcctaaagttaccaccaaagtatactggcagagaagcgactaagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agactctaaatcaactcctaaagttaccaccaaagtatactggcagagaagcgactaagt 384
Query: 185 tacagatcttagagacctacaaatctaagttttttttttaaattctgcattcttaatatt 244
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 385 tacagatcttagagacctacaaatctaagttttttttaaaaattctgcattcttaatgtt 444
Query: 245 tttatggtgttgaaaataaaaattttaaaaaagaaaacatttgcaacatgggaatgttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttatggtgttgaaaataaaaattttaaaaaagaaaacatttgcaacatgggaatgttta 504
Query: 305 acagtagcttttcctttcctaatgcaagttacacctgggattcaagacaagtgtggcatg 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acagtatcttttcctttcctaatgcaagttacacctgggattcaagacaagtgtggcatg 564
Query: 365 gtctaacctatagatgccctgagggttggggtagaaaattgctatttatggataagtaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtctaacctatagatgccctgagggttggggtagaaaattgctatttatggataagtaag 624
Query: 425 gtacaagtttaagactgatgcctacaaacttcctggtatctcatcttgactagaccactg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtacaagtttaagactgatgcctacaaacttcctggtatctcatcttgactagaccactg 684
Query: 485 agt 487
|||
Sbjct: 685 agt 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_b19.g1 MSMg01no347_b19.g1 CHROMAT_FILE:
MSMg01no347_b19.g1 PHD_FILE: MSMg01no347_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:59 2005
(305 letters)
>mm_chr10_122649196_122649898
Length = 703
Score = 534 bits (276), Expect = e-156
Identities = 297/305 (97%), Gaps = 2/305 (0%)
Strand = Plus / Minus
Query: 1 caactcttatgtcttcctaccttacctacttgccagctgcacatgatttgtggatatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caactcttatgtcttcctaccttacctacttgccagctgcacatgatttgtggatatgtt 392
Query: 61 gaggagacaggaagtagaaggttatctaaaagctggactccatgatgtagcttctatgtc 120
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 391 gaggagacaggaagtagaagtttatctaaaagctggactccaggatgtagcttctatgtc 332
Query: 121 atcatttactaggggataggactttgtaatcatgtagctatttgggggtgggggggggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 331 atcatttactaggggataggactttgtaatcatgtagctatttgggggtagggggg--tc 274
Query: 181 atgttatatggactgacctaagttgtattatacttanaaatataaaatggagccatgaat 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 273 atgttatatggactgacctaagttgtattatacttagaaatataaaatggagccatgaat 214
Query: 241 ttgaggtgggtggtataattattttataatttaaaaggttttaatatattaacaatatag 300
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 213 ttgaggtgggtggtataattattttctaatttaaaaggttttaatataataacaatatag 154
Query: 301 aggag 305
|||||
Sbjct: 153 aggag 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 703
Length adjustment: 9
Effective length of query: 296
Effective length of database: 694
Effective search space: 205424
Effective search space used: 205424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
