Query= MSMg01no348_e19.b1 MSMg01no348_e19.b1 CHROMAT_FILE:
MSMg01no348_e19.b1 PHD_FILE: MSMg01no348_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(570 letters)
>mm_chr10_122642638_122643608
Length = 971
Score = 936 bits (484), Expect = 0.0
Identities = 542/562 (96%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 9 gaattcttatgtttaccacaatgcacttagaagcagatagtagaaaaaatgataaggcat 68
||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 208 gaattcttatggataaaacaatgcacttagaagcagatagtagaaaagatgataaggcat 267
Query: 69 atgctatatgtttatgaatattctccaattacatcatagcattacaggtaaaagacatga 128
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 268 atactatatgtttatgaatattctccaattacatcatagcattacagataaaagacatga 327
Query: 129 ttttacctatggattgatagccgggaagacagaatagtgactctcca--gtgatcgccat 186
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 328 ttttacctatggattgatagccgggaaggcagaatagtgactctggatagtgatcgccat 387
Query: 187 gttctaatctccgaatcagtgaatgtgttatagtcatggcttaaagggactttgtagatg 246
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 388 gttctaatctccgaatcagtgaatgtgttatagtcatggcttaaagggacttcgtagatg 447
Query: 247 aggttaaggttacagaccctgaaatgaggaattatttaagcgagtccaggctaaccacaa 306
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 448 aggttaaggttacagaccttgaaatgaggaattatttaagcgagtccaagctaaccacaa 507
Query: 307 aaataaaagaaatgtttttcctatgtttataaggtgagaagactacggggaccgagctta 366
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 508 aagtaaaagaaatgtttttcctgtgtttataaggtgagaagactacggggaccgagctta 567
Query: 367 gaagacgggataaagagccacgagctagtagtgacgtggatgccttttggaagctgggca 426
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 568 gaagacgggataaagagccacgagctagtagtggcgtggatgccttttggaagctgggca 627
Query: 427 aggccaggaaatatgagctcccttctaaattcagcagcaagcagcatagtgtcaccaaca 486
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 628 aggccaggaaatatgagctcccttctaaattcagcagcaaggagcatagtgtcaccaaca 687
Query: 487 ctgtgagtttagcttcattagatttgcatcagaagcctaagccatgtgacaatgctctgc 546
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctgtgagtttcgcttcattagatttgcatcagaagcctaagccatgtgacaatgctctgc 747
Query: 547 cactctctctagtcacaaggtg 568
||||||||||||||||||||||
Sbjct: 748 cactctctctagtcacaaggtg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space: 538160
Effective search space used: 538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_e19.g1 MSMg01no348_e19.g1 CHROMAT_FILE:
MSMg01no348_e19.g1 PHD_FILE: MSMg01no348_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(475 letters)
>mm_chr10_122817886_122818766
Length = 881
Score = 895 bits (463), Expect = 0.0
Identities = 474/481 (98%), Gaps = 6/481 (1%)
Strand = Plus / Minus
Query: 1 tcagggaattcttcagcaggaggaataccagtaactcatgtggtgaccacaatctaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagggaattcttcagcaggaggaataccagtaactcatgtggtgaccacaatctaatgc 622
Query: 61 tctgacagacacaaagacatggacaggatctttgatcttacaaagctgtgcggtaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgacagacacaaagacatggacaggatctttgatcttacaaagctgtgcggtaatgca 562
Query: 121 catatattctggagcccggagcctggaagggttgacactgagtagaaacaaagatacagg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catatattctggagccctgagcctggaagggttgacactgagtagaaacaaagatacagg 502
Query: 181 aaagacaagactgcttggagcatggta------gaagggcttatcaaggaaaaaatagtg 234
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aaagacaagactgcttggagcatggtaagcaatgaagggcttatcaaggaaaaaatagtg 442
Query: 235 gagacctggtgctacacagaaattctttcttatgaagaggattaaaacatggaaattcct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagacctggtgctacacagaaattctttcttatgaagaggattaaaacatggaaattcct 382
Query: 295 ggatgcctagtagtggtccttgactggtacaatctcaactgtcattcattgtatgtggga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatgcctagtagtggtccttgactggtacaatctcaactgtcattcattgtatgtggga 322
Query: 355 gtagcatgacttgtaacctgaagaaatacttttcagacatgagcaccactgtgtgttcac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagcatgacttgtaacctgaagaaatacttttcagacatgagcaccactgtgtgttcac 262
Query: 415 atacatacacagacatgtacacacatttaccatgtgttaattctgtctccttcccttacc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacatacacagacatgtacacacatttaccatgtgttaattctgtctccttcccttacc 202
Query: 475 t 475
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 881
Length adjustment: 10
Effective length of query: 465
Effective length of database: 871
Effective search space: 405015
Effective search space used: 405015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
