Query= MSMg01no348_l15.b1 MSMg01no348_l15.b1 CHROMAT_FILE:
MSMg01no348_l15.b1 PHD_FILE: MSMg01no348_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:07 2005
(539 letters)
>mm_chr10_80976504_80977442
Length = 939
Score = 988 bits (511), Expect = 0.0
Identities = 532/539 (98%)
Strand = Plus / Plus
Query: 1 aatcagttcacaagtgtaaccctagctctggggaaccagcggcctcttctggcccctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcagttcacaagtgtaaccctagctctggggaaccagcggcctcttctggcccctatg 260
Query: 61 ggaactgcactcacatgcacagacacaatttaaagtaaaataaatagtaaaagaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaactgcactcacatgcacagacacaatttaaagtaaaataaatagtaaaagaaagaaa 320
Query: 121 gagagaaagaaagaaagaagtcaactgtcctagtaaactcgtttccagcataaggggaac 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gagagaaagaaagaaagaagtcaactgtcctagtaaactcgtttccaacataaggggaac 380
Query: 181 ccgactggtggatctttgggtgttcttgggatccatgctgggaagtgccttccatccagc 240
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgactggcggatctttgggtgttcttgggatccatgctgggaagtgccttccatccagc 440
Query: 241 tctggaaatgttaaatagttcaggggactgggtctcaccttgctgtcaggcctgctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggaaatgttaaatagttcaggggactgggtctcaccttgctgtcaggcctgctgaag 500
Query: 301 gggatctgcagccggtccattgcatcgatcatggcctgcatggagacgaagatgttctgg 360
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 gggatctgcagccggtccatcgcatctatcatggcctgcatggagacgaagatgttctgg 560
Query: 361 tagatgagcagccggaaggctctgcggtcctcctctgagtagcccgcaccgtgaatgatg 420
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 561 tagatgagcagccggaaggctctgcggtcctcctccgagtagcccacaccgtgaatgatg 620
Query: 421 cgcatctgcttgatgaacgtactcttcccgctctcaccaggccctggggacaacagcgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgcatctgcttgatgaacgtactcttcccgctctcaccaggccctggggacaacagcgtg 680
Query: 481 cttagaaggaaggactcaccggtatacacatggtgctcatggtaaacacagtgcccaca 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttagaaggaaggactcaccggtatacacatggtgctcatggtaaacacagtgcccaca 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_l15.g1 MSMg01no348_l15.g1 CHROMAT_FILE:
MSMg01no348_l15.g1 PHD_FILE: MSMg01no348_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:07 2005
(455 letters)
>mm_chr10_81480526_81481379
Length = 854
Score = 774 bits (400), Expect = 0.0
Identities = 442/456 (96%), Gaps = 3/456 (0%)
Strand = Plus / Minus
Query: 1 aatagctgtagcttttcccttgcttcttgagataattctatccagggttttaaataggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 654 aatagctgtagcttttcccttgcttcttgagataattctatccagggttttaaatagatt 595
Query: 61 gcttagtgggtaattaggagttaaacattttgattttgccgaaatttacttgaaatatga 120
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 594 gcttagtgggtaattaggaattaaacattttgattttgcctaaatttacttgaaatatga 535
Query: 121 tgtacatgaggcaaggaaagaatttataaacaaattcctcttccctgtgtgccctagctt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 534 tgtacatgaggcaaggaaagaatttataaacaaatttctcttccctgtgtgccctagctt 475
Query: 181 ccctccattgtaaagttagcttggacacaggctctcttggtcttcatcaagaaatggtgg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 474 ccctccattgtaaagttagcttggacacaggctctcttggtcttcatcaagaaacggtgg 415
Query: 241 gaacttaagattagatcgatgatcatgacttttccccatcttcagggggattttcaggca 300
|||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 414 gaacttaagattagattgatgatcacgtcttttccccatcttcagggggattttcaggca 355
Query: 301 atggagtatgaatagctaaaa-gaagctacaataaaagagctgaggggactgactgtcac 359
|||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||
Sbjct: 354 atggagtatggatagctaaaaggaa-ctacaataaaggagctgaggggactgactgtcac 296
Query: 360 ctggacaggaattggtggtactgtttttactttcaattttacttgaacagggaaaatatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 295 ctggacaggaattggtggtactgtttttactttcaattttacttgaacaggaaaaatatt 236
Query: 420 ccttttattttacttttctatttttttggctcttta 455
|||||||||||||||||||| |||||||||||||||
Sbjct: 235 ccttttattttacttttcta-ttttttggctcttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
