Query= MSMg01no352_m02.b1 MSMg01no352_m02.b1 CHROMAT_FILE:
MSMg01no352_m02.b1 PHD_FILE: MSMg01no352_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:25 2005
(468 letters)
>mm_chr10_41741051_41741921
Length = 871
Score = 806 bits (417), Expect = 0.0
Identities = 454/467 (97%), Gaps = 3/467 (0%)
Strand = Plus / Plus
Query: 5 gaattcatcaaacttacagctcatgcgatccttgcatacaaattcaaaagcaccgatgcg 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcaaactgagagctcatgcgatccttgcatacaaattcaaaagcaccgatgcg 264
Query: 65 tttaaatgtaattctgcagaacttcacagctcgaggagaatccactaaattcatggaact 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaaatgtaattctgcagaactccacagctcgaggagaatccactaaattcatggaact 324
Query: 125 tgatagaaagcaccaactcaaagggtcacaccacaaacctctgtttgctgggg-tcagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 tgatagaaagcaccaactcaaagggtcacaccacaaacctctgtttgctggggctcagca 384
Query: 184 gttgccagtgcacctaagaatgatgacgcgtttacacactttactcataacacgttgctt 243
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 gttgccggtgcacctaagaatgatgacgcgtttacacactttacccataacacgttgctt 444
Query: 244 ctgccaacctggccatgagctggctgagctcaaatacttggcagcgatcctaatgaggaa 303
|||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 445 ctgccaacctggtcatgagctggcagagctcaaatacttggcagtgatcctaatgaggaa 504
Query: 304 ggctctattcagttaccacatcagtacaaacggatgcaaccattagtgtttcgttggagg 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 ggctctattcagttaccacatcagtacaaacggatgcaaccattagtgtttcgtcggagg 564
Query: 364 gaaggg--gggtcctagtgttccagagtatggagggctcttcgagaggcttcatcctatg 421
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 gaagggaggggtcctagtgttccagagtatggagggctctttgagaggcttcatcctatg 624
Query: 422 catctgctgctgtgcctcgtccatgttaagtctttaaagagaagtag 468
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 catctgctgctgtgcctcgtccatgttaagtctttaaagagaagtag 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 871
Length adjustment: 10
Effective length of query: 458
Effective length of database: 861
Effective search space: 394338
Effective search space used: 394338
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_m02.g1 MSMg01no352_m02.g1 CHROMAT_FILE:
MSMg01no352_m02.g1 PHD_FILE: MSMg01no352_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:25 2005
(219 letters)
>mm_chr10_41910827_41911445
Length = 619
Score = 385 bits (199), Expect = e-111
Identities = 214/219 (97%)
Strand = Plus / Minus
Query: 1 agtgttgggatctcagagtgtgggtgggcatcctgggcacttgatgtttgtgccagatgt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 419 agtgttgggatctcagagtgtgggtaggcatcctgggcacttgatgtttgtgccagatgt 360
Query: 61 aaggcacaggtggagaacatctggggaaggcagagtgaagggctgtgcggcagctcacct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 359 aaggcacaggtggagaacatctggggaaggcagagtgaagggctgtgcggtggctcacct 300
Query: 121 ggataggaggagagcaggctgggcggagcgtccccaaggtgacccccaggagagagtggt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggataggaggagagtaggctgggcggagcgtccccaaggtgacccccaggagagagtggt 240
Query: 181 ggagagagtggaggatcccgcaggtctttgccacttaaa 219
||||||||||||||||||||||||||||||||| |||||
Sbjct: 239 ggagagagtggaggatcccgcaggtctttgccaattaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|