Query= MSMg01no357_d18.b1 MSMg01no357_d18.b1 CHROMAT_FILE:
MSMg01no357_d18.b1 PHD_FILE: MSMg01no357_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:10 2005
(545 letters)
>mm_chr10_57499409_57500355
Length = 947
Score = 1023 bits (529), Expect = 0.0
Identities = 539/543 (99%), Gaps = 2/543 (0%)
Strand = Plus / Minus
Query: 5 gaattcccaggagtagactctgagagagacaatcaacattcaggatctctgctggaattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaattcccaggagtagactctgagagagacaatcaacattcaggatctctgctggaattt 688
Query: 65 cttttcatcaccaaattatacaaaatcctaagggaacatcttcatagttgaaatgaaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cttttcatcaccaaattatacaaaatcctaagggaacatcttcatagttgaaatgaaata 628
Query: 125 tgccttgtgctgattgtactgttgacacagccctcctgtaatcggcaagagagaaagaac 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgacttgtgctgattgtactgttgacacagccctcctgtaatcggcaagagagaaagaac 568
Query: 185 tagaccccctcttccctgcccccttttctgaaattaggtcatctgtc--tcttacctaca 242
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 567 tagaccccctcttccctgcccccttttctgaaattaggtcacctgtctatcttacctaca 508
Query: 243 ctttcttgcaccatctccacaaccaagatgctaaaactgcttggtgcctgagttgcttag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctttcttgcaccatctccacaaccaagatgctaaaactgcttggtgcctgagttgcttag 448
Query: 303 agtaaggaagatcagaacctgcaagactagggttaatgtgattctgataactgaatttga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtaaggaagatcagaacctgcaagactagggttaatgtgattctgataactgaatttga 388
Query: 363 ttgagaaggtactgaggcagtgaagggggggaaacaatggcccatctgttccttagtgag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttgagaaggtactgaggcagtgaagggggggaaacaatggcccatctgttccttagtgag 328
Query: 423 gagaagtttgtggtttggtacacgcagaaaatacctagcttggaccagaaagcaactgta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gagaagtttgtggtttggtacacgcagaaaatacctagcttggaccagaaagcaactgta 268
Query: 483 aatccagctagcatagtttaaagaggccagggcaacatttcttctcttttctacttcctg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatccagctagcatagtttaaagaggccagggcaacatttcttctcttttctacttcctg 208
Query: 543 ctg 545
|||
Sbjct: 207 ctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 947
Length adjustment: 10
Effective length of query: 535
Effective length of database: 937
Effective search space: 501295
Effective search space used: 501295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_d18.g1 MSMg01no357_d18.g1 CHROMAT_FILE:
MSMg01no357_d18.g1 PHD_FILE: MSMg01no357_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:10 2005
(465 letters)
>mm_chr10_57364433_57365299
Length = 867
Score = 791 bits (409), Expect = 0.0
Identities = 452/467 (96%), Gaps = 2/467 (0%)
Strand = Plus / Plus
Query: 1 catttctaaagtggtgacatgactaatggcccatgcacctctgcatgaatccttcctttt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttgtaaagtggtgacatgactaatggcccatgcacctctgcatgaatccttcctttt 260
Query: 61 ctcctgaaaagtttgggaacactgggggaatgaggtcagagaagagctcatggctggttg 120
|||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 261 ctcctgaagagtttgggaacactgggggaatgaggtcagagaagaactcatgactggttg 320
Query: 121 aggaaagttttcagattattcactacacgttgccttcaaagaatgggtcagatatagaaa 180
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaagttttcagattatttactacatgttgccttcaaagaatgggtcagatatagaaa 380
Query: 181 atatgacgactttaggttagttgagctgctatggtaaccttaggacagaacatctcaatg 240
|||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 381 atatgatgactttaggttggttgagctgctatggtaactttgggacagaacatctcaatg 440
Query: 241 tgggtttaactatacataaaaaaaa--tgagagttttgcctggaagttgctatgctaaac 298
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 441 tgggtttaactatacataaaaaaaaaatgaaagttttgcctggaagttgctatgctaaac 500
Query: 299 tagagttgtacacttaaatattttgtagagttaaattttctctcctctttctttcttgct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagagttgtacacttaaatattttgtagagttaaattttctctcctctttctttcttgct 560
Query: 359 ctttctttccctccctcccgtttgtccttcctgagagagtcttactatgtagccacaaac 418
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttctttccctccctcccttttgtccttcctgagagagtcttactatgtagccacaaac 620
Query: 419 ggtctcatacaacatgtcttcctcagcctcccaagtcctggaataac 465
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtctcatacaacatgtcttcctcagcctcccaagtcctggaataac 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 867
Length adjustment: 10
Effective length of query: 455
Effective length of database: 857
Effective search space: 389935
Effective search space used: 389935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
