Query= MSMg01no358_i07.b1 MSMg01no358_i07.b1 CHROMAT_FILE:
MSMg01no358_i07.b1 PHD_FILE: MSMg01no358_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:48 2005
(603 letters)
>mm_chr10_123701954_123702957
Length = 1004
Score = 706 bits (365), Expect = 0.0
Identities = 374/377 (99%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 228 acaatactctattcttttctctggctcttacattctttctctccctcttcttctgtgttc 287
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1004 acaatactctattcttttctctggctctcacattctttctctccctcttcttctgtgttc 945
Query: 288 cctgaaccttggagggaagacaggtgtgaagtattttcattcatttatggctaaaagtta 347
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 944 cctgaaccttggagggaagacaggtgtgaagtattttcattcatgtatggctaaaagtta 885
Query: 348 gattatgctatatgatggttaatttgattgtgaacttgacaagatcttagagtcattgaa 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gattatgctatatgatggttaatttgattgtgaacttgacaagatcttagagtcattgaa 825
Query: 408 gagacaagtctctaggcatgtatatttttattagattaagacaagaatgtttatggtagc 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gagacaagtctctaggcatgtatatttttattagattaagacaagaatgtttatggtagc 765
Query: 468 tgaacgtcattgtttgattttttgtctttacatgcttaattatgaatataagcagttgcc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgaacgtcattgtttgattttttgtctttacatgcttaattatgaatataagcagttgcc 705
Query: 528 taatgttctcacctccctgatctctccagctcatgactgactgtgagctaaaagaaaca- 586
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taatgttctcacctccctgatctctccagctcatgactgactgtgagctaaaagaaacat 645
Query: 587 tttttttttcttaaaat 603
|||||||||||||||||
Sbjct: 644 tttttttttcttaaaat 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_i07.g1 MSMg01no358_i07.g1 CHROMAT_FILE:
MSMg01no358_i07.g1 PHD_FILE: MSMg01no358_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:48 2005
(471 letters)
>mm_chr10_123507459_123508330
Length = 872
Score = 725 bits (375), Expect = 0.0
Identities = 429/472 (90%), Gaps = 39/472 (8%)
Strand = Plus / Plus
Query: 1 tgtctttatacctgtcattcctttattacatgtgctcgctcttacagttttatgtaagaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 239 tgtctttatacctgtcattcctttattacatgtgctcactcttacagttttatgtaagaa 298
Query: 61 gatgaaatatatatatatatatatatatatatatatatatatatatatatatatatatat 120
||||||||||||||||||||||||||
Sbjct: 299 gatgaaatatatatatatatatatat---------------------------------- 324
Query: 121 acacacacacacacacaacagaaagccattgtatataatcattaggtgtttgaagtttaa 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 ----acacacacacacaacagaaaaccattgtatataatcattaggtgtttgaagtttaa 380
Query: 181 aaattgatgtaatttacctaaggaaaaacttaccagaactttagtatagtacagcctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattgatgtaatttacctaaggaaaaacttaccagaactttagtatagtacagcctgca 440
Query: 241 gagattgactaggcacacattagtgactcaatgatttaatcactgaaaaatcccaggtgc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagattgactaggcacacaatagtgactcaatgatttaatcactgaaaaatcccaggtgc 500
Query: 301 tcctttctttaaacatattatcattaattaatattcttttataaatcta-ttctccataa 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 tcctttctttaaacatattatcattaattaatattcttttataaatctacttctccataa 560
Query: 360 aagaatcatttcaggttatgcctagcccataacattttgtgaaaagtgagttacacaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaatcatttcaggttatgcctagcccataacattttgtgaaaagtgagttacacaata 620
Query: 420 aaattaggtttaaaattaaacataacatanagtttgtaagcaaacatgaata 471
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 aaattaggtttaaaattaaacataacataaagtttgtaagcaaacatgaata 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space: 397382
Effective search space used: 397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
