Query= MSMg01no360_g10.b1 MSMg01no360_g10.b1 CHROMAT_FILE:
MSMg01no360_g10.b1 PHD_FILE: MSMg01no360_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:08 2005
(373 letters)
>mm_chr10_120237449_120238221
Length = 773
Score = 600 bits (310), Expect = e-176
Identities = 346/358 (96%), Gaps = 2/358 (0%)
Strand = Plus / Plus
Query: 17 tgcgtgcgtgcgtgcgtgcgtgcgtgcttgcgtaggccggaagtcagtttggggtgttgc 76
|||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgcgtgtgtgcatgcgtgtgtgcgtgcttgcgtaggccggaagtcagtttggggtgttgc 276
Query: 77 tcttgaggtgccgtccaccttattttgggagccggggactggcttcaggttcacccagta 136
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 277 tcttgaggtgccgtccaccttattttggaagccggggactggcttcaggttcacccagta 336
Query: 137 ttagactgggcttgctggccagcaggcccaagagatctcctgttcccacctccccagcgc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttagactgggcttgctggccagcaggcccaagagatctcctgttcccacctccccagcgc 396
Query: 197 ttaagtgacaagcatgaaccttcggtatgtgtatgcgccatctgtgntc-acagaggaag 255
||||| |||||||||||||||||||||||||||||||||||| | | || ||||||||||
Sbjct: 397 ttaagagacaagcatgaaccttcggtatgtgtatgcgccatcagag-tctacagaggaag 455
Query: 256 gtccctatcaagaactgagccggtgcctgagccagggccgggtttcccaaactcccaacc 315
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 456 gtccccatcaagaactgagccggtgcctgagccagggctgggtttcccaaactcccaacc 515
Query: 316 ggaggaaagagagattattcttctaaacaagaaagagaagaagggaagaaaaggaaga 373
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 516 ggaggaaagagagattattcttctaaacaagaaagagaagaagggaaggaaaggaaga 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_g10.g1 MSMg01no360_g10.g1 CHROMAT_FILE:
MSMg01no360_g10.g1 PHD_FILE: MSMg01no360_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:08 2005
(246 letters)
>mm_chr10_120418578_120419223
Length = 646
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 tgtgtatacagaaaggaaggctcagaaacagtaaatttaccaaagttccaatggaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtgtatacagaaaggaaggctcagaaacagtaaatttaccaaagttccaatggaaatat 250
Query: 61 aagttggtatttaaaagttcatggcagttgaggtaggacctgtagatactgtattatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagttggtatttaaaagttcatggcagttgaggtaggacctgtagatactgtattatcac 190
Query: 121 tttacacagtgctgaaacaaaatctgatcataggaagttaaggaaggaagggtttatttt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 189 tttacacagtgctgaaacaaaatctgaccataggaagttaaggaaggaagggtttatttt 130
Query: 181 gaggccaaagttcatggccgtcaaggaatgaagcaggaacccgagggggctgatcaagtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 129 gaggccaaagttcatggccgtcaaggaatgaagcaggaacccgagggggccgatcaagtg 70
Query: 241 caacc 245
|||||
Sbjct: 69 caacc 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
