Query= MSMg01no360_p23.b1 MSMg01no360_p23.b1 CHROMAT_FILE:
MSMg01no360_p23.b1 PHD_FILE: MSMg01no360_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:54 2005
(518 letters)
>mm_chr10_21329422_21330339
Length = 918
Score = 992 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Minus
Query: 1 ctacatagtaataccatatttaaaaaaagaaaaaggaacaatctttatagatgccaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ctacatagtaataccatatttaaaaaaagaaaaaggaacaatctttatagatgccaaatg 658
Query: 61 aatttatcagtggcaccttagctcccagagtaagttaaagttgataaaacatttgcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aatttatcagtggcaccttagctcccagagtaagttaaagttgataaaacatttgcaaaa 598
Query: 121 ggagggtcataaatgaacaacccaatgtactactgacatcatcacctcactaaaattaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggagggtcataaatgaacaacccaatgtactactgacatcatcacctcactaaaattaat 538
Query: 181 ttttataccttaggaacaatgttaaccattgtgcagtttaaatgaaacgtaaacatacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttttataccttaggaacaatgttaaccattgtgcagtttaaatgaaacgtaaacatacca 478
Query: 241 tttaaatctggaacatcgcaaaaggaacacaaatcaaaggagagcaggctaaaggaaatg 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 477 tttaaatctggaacatcgcaaaaggaacacaaatcaaaagagagcaggctaaaggaaatg 418
Query: 301 cccagagcttgcgtggctcctgccagaaagatctttcacctctgtgtacaaaacccatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cccagagcttgcgtggctcctgccagaaagatctttcacctctgtgtacaaaacccatgt 358
Query: 361 tcccacagatctctggagcaataaaaaatgtactgtacatcatgagctgacttgctataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcccacagatctctggagcaataaaaaatgtactgtacatcatgagctgacttgctataa 298
Query: 421 atgttgtggactgtgcaagcgtggaaggccacctgctctttgtacaaaggacacagacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgttgtggactgtgcaagcgtggaaggccacctgctctttgtacaaaggacacagacaa 238
Query: 481 tggggctgggatctgaaactaagaagaggaagaattc 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tggggctgggatctgaaactaagaagaggaagaattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_p23.g1 MSMg01no360_p23.g1 CHROMAT_FILE:
MSMg01no360_p23.g1 PHD_FILE: MSMg01no360_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:54 2005
(469 letters)
>mm_chr10_21189044_21189912
Length = 869
Score = 874 bits (452), Expect = 0.0
Identities = 466/472 (98%), Gaps = 3/472 (0%)
Strand = Plus / Plus
Query: 1 cactgagtaagtatctcaaccacactccaggatagacccatgcccgggagtagttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cactgagtaagtatctcaaccacactccaggatagacccatgcccgggagtagttgacaa 257
Query: 61 aacaaagtcaatagatattttttgttgactttttgttttggcttttttttt---ccatct 117
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 258 aacaaagtcaatagatattttttgttgactttttgttttggcttttttttttttccatct 317
Query: 118 ttttggtcctttgcttgtttgttttgattttcatttttgaggattttgtttgctttgctt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttttggtcctttgcttgtttgttttgattttcatttttgaggattttgtttgctttgctt 377
Query: 178 ttggttcttttgaaagagagagggagggaaaaagcatttacgttgggtgggaaaggagat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttggttcttttgaaagagagagggagggaaaaagcatttacgttgggtgggaaaggagat 437
Query: 238 atggaggatctgagaggagtcagaggagaaacacattgcacgaaaatgtttcttgttaaa 297
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 atggaggatctgagaggagtcagaggagaaacacattgcacgaaaatatttcttgttaaa 497
Query: 298 aaagaaagaactctagctaaacgtatgtccagcaagccagcaaatagcatcacctgatgg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaagaaagaactctagctaaacgtatgtccagcaagccagcaaatagcatcacctgatgg 557
Query: 358 tttttacctcaaagtcttgctcgagttcctgccctgattttctcagtgatggactgtaac 417
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 558 tttttacctcaaagtcttgctcaagttcctgccctgactttctcagtgatggactgtaac 617
Query: 418 ccctaaaatgaaacaaaccttttactctcccaagttgcttttggtcagtgtg 469
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccctaaaatgaaacaaaccttttactctcccaagttgcttttggtcagtgtg 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
