NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGCAGCTGCACTTCTCGGCAGCAGCACCAGGAGGCGCTAAT
GCACCACAGTTCGTTGTCCCTTTGCCAGCCCAGGTGTTCCCAGCCTGCTC
TGAGCTCAGCAAGCTCTGAACCTGCTGTACAACCCAGGACATGGCAGATG
GACAAACTGCAGCCGCAGTCGACCTTAGATGACGTTTACATAAGGGCATG
ATTTTAGTTTCTTTGTGTATCTGGGAGGGAACTTCATGAGGTGAGGCGAA
GGACTCTTTACTTTTCTTCCTATTCTTCGTGGCAAGATTAGTGGCTGCGG
CCGGTAAGCTGCGGCCGGTAAGGGAGGGAGGAAACAATTCTTTGCTTTTG
CTTGAATTAATTGCTGGCCATAAATAGCTTACGAAAGTCAGGGACTTCCG
GCTGTGGAGCAGGAATTCTTAAGACCTGGAAGGAGCAGACCGAGTGTGAT
GGAGAGACATCTCTATTTCCTTAGAAAACAATGAAAATAGAAGATTGTGA
TTATGTGATTGTATGATCACGATCATATTTTATTTTAAGAAAAGGTAAAC
TGTCTTGTACCAGGCCATGTCTCAGAACATGAGATGCTGGTCACTGTTAC
AGTTTGGATCAAATATGCTCAGTGGGAATAAAAAATCCCAGGGCTAAATT
CCCTAAATGCCTTCCATCCTAAGCCAGGAGCCAGATAACCAAG

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACTCAGATATTAATACAT
ATGAATTCATGAAATTCTTAGGCAAATGGATGGATCTGGAGGGTATCATC
CTGAGTGAGGTAACCCAATCACAAAAGTACACACATGGTAGGCAGTCACT
GATAAGTGGATATTAGCCCAAAAGCTCCAAACCACATGAAGACCACATGA
ATCTCAAGAAGAACGAAGACCAAGGTGTGGGTGCTTTGGTTCTTCTAAGA
AATGGAACAGGATACTCATAGGAGTAAATATGGAGATAAATTGTAGAGCA
GAGACTGAAGAATAGGGCATACAGAGACTGTCCCACCTGGGGATTCATCC
CATATACAGCTACCAAAAGCAGACCCTGTTGTGAATGCCAAGAAGTGCAT
GCTGAAAGGAGCCTGATGTGCTTCTCTCCTGAGAGGCCCTGCCAGAGTCT
TACTAATACAGAGGCGGATGCTCCCAGCCAACCATTGGTCTGAGTATGGG
ATCTCCAATAGAGGAGTTAGGGAAAGGATGAAGGAGTTCAAGAGGTTTGC
AACCCCATAGAAAGAACAACAATATCAACCATCCAGACCCCCCAGCGTTC
CCAAGGACTAAGCATCAACCATGGCTCCAGCTGCTTATGTATCAGAGGAT
GGCCTTGTCAGACATCCATGGGGCACAGGTCCTTGGTCCTATTAAGGTCG
CATAATGCC

Query= MSMg01no361_m08.b1 MSMg01no361_m08.b1 CHROMAT_FILE:
MSMg01no361_m08.b1 PHD_FILE: MSMg01no361_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:54 2005
         (555 letters)



>mm_chr10_4310067_4311020
          Length = 954

 Score =  876 bits (453), Expect = 0.0
 Identities = 499/523 (95%), Gaps = 15/523 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgcagctgcacttctcggcagcagcaccaggaggcgctaatgcaccacagttcg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 508 gaattctgcagctgcacttctcggcagcagcaccaggaggcgctaatgcaccgtagttcg 449

                                                                       
Query: 65  ttgtccctttgccagcccaggtgttcccagcctgctctgagctcagcaagctctgaacct 124
           ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 448 ttgtccctttgccagcccaggtgttgccagcctgctctgagctcagcatgctctgaacct 389

                                                                       
Query: 125 gctgtacaacccaggacatggcagatggacaaactgcagccgcagtcgaccttagatgac 184
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 388 cctgtacaacccaggacatggcagatggacaaactgcagccgcattcgaccttagatgac 329

                                                                       
Query: 185 gtttacataagggcatgattttagtttctttgtgtatctgggagggaacttcatgaggtg 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtttacataagggcatga-tttagtttctttgtgtatctgggagggaacttcatgaggtg 270

                                                                       
Query: 245 aggcgaaggactctttacttttcttcctattcttcgtggcaagattagtggctgcggccg 304
           ||||||||||||||||||||||||||||||| ||||||| ||||||||||          
Sbjct: 269 aggcgaaggactctttacttttcttcctatttttcgtggtaagattagtg---------- 220

                                                                       
Query: 305 gtaagctgcggccggtaagggagggaggaaacaattctttgcttttgcttgaattaattg 364
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ----gctgcggccggtaagggagggaggaaacaattctttgcttttgcttgaattaattg 164

                                                                       
Query: 365 ctggccataaatagcttacgaaagtcagggacttccggctgtggagcaggaattcttaag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctggccataaatagcttacgaaagtcagggacttccggctgtggagcaggaattcttaag 104

                                                                       
Query: 425 acctggaaggagcagaccgagtgtgatggagagacatctctatttccttagaaaacaatg 484
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 aactggaaggagcagaccgagtgtgatggagagacatctctatttccttagaaaacaatg 44

                                                      
Query: 485 aaaatagaagattgtgattatgtgattgtatgatcacgatcat 527
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaaatagaagattgtgattatgtgattgtatgatcacgatcat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space:   514480
Effective search space used:   514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)