Query= MSMg01no363_a04.b1 MSMg01no363_a04.b1 CHROMAT_FILE:
MSMg01no363_a04.b1 PHD_FILE: MSMg01no363_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:35 2005
(514 letters)
>mm_chr10_114269700_114270613
Length = 914
Score = 712 bits (368), Expect = 0.0
Identities = 383/388 (98%)
Strand = Plus / Minus
Query: 124 gtgacatacaccaaaaattaaatttttatgcatatttattaaaatcaacatgaatcttga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gtgacatacaccaaaaattaaatttttatgcatatttattaaaatcaacatgaatcttga 855
Query: 184 tcaataaattttacaaattacaatatattacattatgatcaaattctgtgaaggctgaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tcaataaattttacaaattacaatatattacattatgatcaaattctgtgaaggctgaaa 795
Query: 244 aaataaaactatgagttcagaatgaaagagtaagttgtgaatctccagcttccagtaaga 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 794 aaataaaactatgagttcagaatgaaagagtaagtcgtgaatctccagcttccagtaaga 735
Query: 304 gcttgtacatgccttctgcaaatttctgcattatttgcattaatttggctcacattaaat 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gcttatacatgccttctgcaaatttctgcattatttgcattaatttggctcacattaaat 675
Query: 364 acatcaggtcaattctatataaaaatcattattgaaaatctataagaaaccagatcactt 423
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 674 acatcaggtcaattctatataaaaatcattattgaaaatctatacgaaaccagatcactt 615
Query: 424 gtggcattaatattgatattaaaaaatatagctgctaatccaagaatatgagagaaagta 483
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 614 gtggcattaatattgatattaaaatatgtagctgctaatccaagaatatgagagaaagta 555
Query: 484 ccaacaattttcaaacctttccttatga 511
||||||||||||||||||||||||||||
Sbjct: 554 ccaacaattttcaaacctttccttatga 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_a04.g1 MSMg01no363_a04.g1 CHROMAT_FILE:
MSMg01no363_a04.g1 PHD_FILE: MSMg01no363_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:35 2005
(374 letters)
>mm_chr10_114128627_114129400
Length = 774
Score = 671 bits (347), Expect = 0.0
Identities = 360/365 (98%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 1 cccataaaggcaaatgcgctgtgccttgaaaagaagcaatcaagcaaactcctttaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccataaaggcaaatgcgctgtgccttgaaaagaagcaatcaagcaaactcctttaggaa 260
Query: 61 acatcgatttacaaattacagagcagcctcaaagggaaacagaagactatctgccataat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 acatcgatttacaaattacagagcagccgcaaagggaaacagaagactatctgccataat 320
Query: 121 taattgaaacctaaataaggtgagtaacaaaatattgtgccagtcatcctatctgccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattgaaacctaaataaggtgagtaacaaaatattgtgccagtcatcctatctgccatc 380
Query: 181 taattaacttataaatatctatgatgaaaacgcgtttgcaagagttgggtatgtcctcat 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taattaacttataaacatctatgatgaaaacgcgtttgcaagagttgggtatgtcctcat 440
Query: 241 ggtattgctgctgcgacttttcagacttgtttcttcagtttttctttccatgtttctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtattgctgctgcgacttttcagacttgtttcttcagtttttctttccatgtttctttc 500
Query: 301 tttctttctttctttctttctttctttctttctttctttctttctttctttttttttt-- 358
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 tttctttctttctttctttctttctttctttctttctttctttcttt-ttttttttttgc 559
Query: 359 ttttt 363
|||||
Sbjct: 560 ttttt 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
