Query= MSMg01no365_f02.b1 MSMg01no365_f02.b1 CHROMAT_FILE:
MSMg01no365_f02.b1 PHD_FILE: MSMg01no365_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:47 2005
(491 letters)
>mm_chr10_126684202_126685092
Length = 891
Score = 712 bits (368), Expect = 0.0
Identities = 386/392 (98%), Gaps = 2/392 (0%)
Strand = Plus / Minus
Query: 5 gaattccacattaaggtgatcagcatgtgacttctgggggcctccgatgacgacggagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaattccacattaaggtgatcagcatgtgacttctgggggcctccgatgacgacggagaa 333
Query: 65 ggcccagaataagccagctgaatctttactctggttaccccaacttcccgccaagaatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggcccagaataagccagctgaatctttactctggttaccccaacttcccgccaagaatgt 273
Query: 125 cccagcctccactgtcctggtgcctgtcatattggtttgggattcctgtgttggagttaa 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 272 cccagcctccactgtcctggtgcctgtcatattggtttgagattcctgtgttggagttaa 213
Query: 185 gatcaccctcttgggctggagagatggctcagaggttaagaacactgactgttcttccag 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gatcacccccttgggctggagagatggctcagaggttaagaacactgactgttcttccag 153
Query: 245 gggacctgacttcagttctcaacacccacagggtggctt-acaaccagtgccagaggatc 303
|||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 152 cggacctgactgcagttctcaacacccacagggtgg-ttcacaaccagtgccagaggatc 94
Query: 304 tgatgggctcttgtcacctctatgggcaccatgcatgcacatgatacacagacatacaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tgatgggctcttgtcacctctatgggcaccatgcatgcacatgatacacagacatacaaa 34
Query: 364 tagacagagcattcatacacacacaaaaaaaa 395
||||||||||||||||||||||||||||||||
Sbjct: 33 tagacagagcattcatacacacacaaaaaaaa 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_f02.g1 MSMg01no365_f02.g1 CHROMAT_FILE:
MSMg01no365_f02.g1 PHD_FILE: MSMg01no365_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:47 2005
(453 letters)
>mm_chr10_126554832_126555684
Length = 853
Score = 868 bits (449), Expect = 0.0
Identities = 452/453 (99%)
Strand = Plus / Plus
Query: 1 agagacccagccacgggacaaactagggttttcttttgtttgttttcctgtagttcgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagacccagccacgggacaaactagggttttcttttgtttgttttcctgtagttcgcaa 260
Query: 61 tagccttaggctcatctctgcctcccaaacttactgagattacaggtaagtactgccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagccttaggctcatctctgcctcccaaacttactgagattacaggtaagtactgccata 320
Query: 121 cccaactgaagacaggcttttggttttggggggctgccctggaacccacttggaagacca 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaactgaagagaggcttttggttttggggggctgccctggaacccacttggaagacca 380
Query: 181 accaggctgcctttaaactcacagagatccacctgtctctgcttcccaagtgctaggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaggctgcctttaaactcacagagatccacctgtctctgcttcccaagtgctaggatt 440
Query: 241 taaggcttgcatggccactgccagccctaaagggagtgttttgttttggttttggttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaggcttgcatggccactgccagccctaaagggagtgttttgttttggttttggttttt 500
Query: 301 gagacaggatttctctgtgcagccctggctatcctggaactcactctgtagaccaggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagacaggatttctctgtgcagccctggctatcctggaactcactctgtagaccaggctg 560
Query: 361 gcctcaaactcagaaatctgcctgccttgcctctgcctcccaagtgctgggatcaaaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctcaaactcagaaatctgcctgccttgcctctgcctcccaagtgctgggatcaaaggc 620
Query: 421 gtgcaccaccattgcccgactgaagagttttaa 453
|||||||||||||||||||||||||||||||||
Sbjct: 621 gtgcaccaccattgcccgactgaagagttttaa 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
