Query= MSMg01no367_n12.b1 MSMg01no367_n12.b1 CHROMAT_FILE:
MSMg01no367_n12.b1 PHD_FILE: MSMg01no367_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:07 2005
(509 letters)
>mm_chr10_120249051_120249959
Length = 909
Score = 920 bits (476), Expect = 0.0
Identities = 503/512 (98%), Gaps = 4/512 (0%)
Strand = Plus / Plus
Query: 1 tcccgtcctgattcgcgtctcctcccatgcacgctgtgcatgccttctttccgttccact 60
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tcccgtccagattcgcgtctcctcccatgcacgctgtgcgcgccttctttccgttccact 260
Query: 61 tcctcttagcttttaatcagacgtttttcactggtttcatgacagagattagagtgtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcttagcttttaatcagacgtttttcactggtttcatgacagagattagagtgtaaa 320
Query: 121 ctgccctgcctatttaccacaggatctcgttatttactgtgtagataatcctagagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgccctgcctatttaccacaggatctcgttatttactgtgtagataatcctagagctct 380
Query: 181 accagaagctgaagccaatacaacatgaaggactttagtctcacccccgccccggccccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagaagctgaagccaatacaacatgaaggactttagtctcacccccgccccggccccc 440
Query: 241 ggccctcaaagaaaggaaatctaatgtaggcattttgtctcttcccaccaacaatcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccctcaaagaaaggaaatctaatgtaggcattttgtctcttcccaccaacaatcccag 500
Query: 301 gggcagcttcccccaagcatcctcaccaactactaccttctagccagatgtcagaaaaag 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcagcttcccctaagcatcctcaccaactactaccttctagccagatgtcagaaaaag 560
Query: 361 ataaaagccc-ataaccccatggatatataaacattaagcaacatgcccc-agagaacca 418
|||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ataaaagcccca-aaccccatggatatataaacattaagcaacatgcccccagagaacca 619
Query: 419 aacatttaaaaaagatttttaaaaaaaa-tctgagacaaatgacaatgaaaacaccaaag 477
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 aacatttaaaaaagatttttaaaaaaaaatctgagacaaatgacaatgaaaacaccaaag 679
Query: 478 tttatgggataatatagcaaaagcagttctaa 509
||||| ||||||||||||||||||||||||||
Sbjct: 680 tttataggataatatagcaaaagcagttctaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_n12.g1 MSMg01no367_n12.g1 CHROMAT_FILE:
MSMg01no367_n12.g1 PHD_FILE: MSMg01no367_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:07 2005
(558 letters)
>mm_chr10_120459481_120460438
Length = 958
Score = 1040 bits (538), Expect = 0.0
Identities = 553/558 (99%)
Strand = Plus / Minus
Query: 1 acgatctttgtgcttcaaccttctctgtgcttagtcattggtgcaagccgctacaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 745 acgatctttgtgcttcaaccttctctgtgcttagtcattggtgcaagccactacaccagg 686
Query: 61 tggaaacatattttaagagtcatgggctgactccttcctataatcccagcaatcaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaaacatattttaagagtcatgggctgactccttcctataatcccagcaatcaagaag 626
Query: 121 ctgaggcaggagcattgtggtgagtttgaggccactctgggttgtagcatgaccttctgc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 ctgaggcaggagcattgtggtgagtttgaggccactctgggttgtagcgtgaccttctgc 566
Query: 181 ctccaaacagagaaaaacaaaaggcctcagttgagttaaaggtaaaagaaaggaaaaaat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctccgaacagagaaaaacaaaaggcctcagttgagttaaaggtaaaagaaaggaaaaaat 506
Query: 241 actcaccaagccaaagctgttcttaaggaaactggaacgacttcgttgatgccaaactaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 505 actcaccaagccaaagctgttcttaaggaaactggaacgacttcattgatgccaaactaa 446
Query: 301 atccacttcaggataagagctattaacagagactgtgggtagtgcagggagacgaatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atccacttcaggataagagctattaacagagactgtgggtagtgcagggagacgaatatt 386
Query: 361 tggcagtttgttatgctagtcactctacttttgtatatgcttggcaagtccattaataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggcagtttgttatgctagtcactctacttttgtatatgcttggcaagtccattaataga 326
Query: 421 aatattaataattaagaggggaaacaattatgtgttcaaacaaagcctagagatgcagcc 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 aatattaataattaagaggggaaacaattatgtgttcaaacaaagcctggagatgcagcc 266
Query: 481 ctggggtagagcctttgcctcacatgtacagggacctgtgtttagtccccagtgcaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggggtagagcctttgcctcacatgtacagggacctgtgtttagtccccagtgcaggaa 206
Query: 541 gaaaccaaacaagaaaag 558
||||||||||||||||||
Sbjct: 205 gaaaccaaacaagaaaag 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|