Query= MSMg01no368_l06.b1 MSMg01no368_l06.b1 CHROMAT_FILE:
MSMg01no368_l06.b1 PHD_FILE: MSMg01no368_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:13 2005
(403 letters)
>mm_chr10_34091132_34091935
Length = 804
Score = 745 bits (385), Expect = 0.0
Identities = 396/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaacatttccacgttcatctaactttctgaatttgctcagggattaaaattta 64
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 604 gaattcttaacatctccacgttcatataactttctgaatttgctcagggattaaaattta 545
Query: 65 cagttcctaattacaatattttcacccttattagccccctattagcctcaaacatagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cagttcctaattacaatattttcacccttattagccccctattagcctcaaacatagatg 485
Query: 125 ggcatcccagctttggtgtctgcatcatcacctgtatggcccgttcctccacctgtgcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggcatcccagctttggtgtctgcatcatcacctgtatggcccgttcctccacctgtgcct 425
Query: 185 catcttcaaaaactctgtggctttctcatgagcacggcattcttcctggaccacatatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catcttcaaaaactctgtggctttctcatgagcacggcattcttcctggaccacatatgg 365
Query: 245 atatgcaaattcagtccatgcttttcttaggtaatttcttatcaaaatagattacagagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atatgcaaattcagtccatgcttttcttaggtaatttcttatcaaaatagattacagagg 305
Query: 305 aagtatttcc-tttttttttttaaccactggttttgattgatacacactaagtctgaagt 363
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aagtatttccttttttttttttaaccactggttttgattgatacacactaagtctgaagt 245
Query: 364 tcttaacctgtangccatgacccatataggggtcaagtga 403
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 244 tcttaacctgtaggccatgacccatataggggtcaagtga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 804
Length adjustment: 9
Effective length of query: 394
Effective length of database: 795
Effective search space: 313230
Effective search space used: 313230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_l06.g1 MSMg01no368_l06.g1 CHROMAT_FILE:
MSMg01no368_l06.g1 PHD_FILE: MSMg01no368_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:13 2005
(368 letters)
>mm_chr10_33944474_33945241
Length = 768
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%)
Strand = Plus / Plus
Query: 4 tagttactctcttaaagttataggttagatccctaaactctagaaaaggaagagtgtatt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 204 tagttactctcttaaagctataggttagatccctaaactctagaaaaggaagaatgtatt 263
Query: 64 acctctccccctccccagctgtgctaggatctaatacacaggcaagcactggaaggagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acctctccccctccccagctgtgctaggatctaatacacaggcaagcactggaaggagag 323
Query: 124 ctacatcttagccctatttagaggtcaagtgcctgctgcacaagcgagagaattgagttc 183
||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||
Sbjct: 324 ctacatcttagccctatttaggggtcaagtgcttgctgcacaagtgtgagaattgagttc 383
Query: 184 tgactccagtgttgtgtctataaaagcacaaagagtggggaatgtgttctaggaggggta 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaccccagtgttgtgtctataaaagcacaaagagtggggaatgtgttctaggaggggta 443
Query: 244 ggggaaggggtgcctcggtaggctcatgctgagaagggagttgagagggtagaaaaagga 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgggaaggggtgcctcggtaggctcatgctgagaagggagttgagagggtagaaaaagga 503
Query: 304 agagagagagagagag 319
||||||||||||||||
Sbjct: 504 agagagagagagagag 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
