Query= MSMg01no368_m05.b1 MSMg01no368_m05.b1 CHROMAT_FILE:
MSMg01no368_m05.b1 PHD_FILE: MSMg01no368_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:18 2005
(243 letters)
>mm_chr10_4399618_4400260
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 aacataggtactatgattctaaaaatataatatgtagatcaccagttgattaacctataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacataggtactatgattctaaaaatataatatgtagatcaccagttgattaacctataa 260
Query: 61 tttatgcacataataattaaactctgtactcagagtggagacatgtgggtgatctgtttt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tttatgcacataataattaaactctgtactcagagtggagacatgtaggtgatctgtttt 320
Query: 121 taatatagtagtaatgtgaaattaaccgaaagaattttggtttttataaattactttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatatagtagtaatgtgaaattaaccgaaagaattttggtttttataaattactttcca 380
Query: 181 ttatcgtacacattcacttggcatttaataatgtgccatttcatctgagcagagagagta 240
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ttaacgtacacattcacttggcatttaataatgtgctatttcatctgagcagagagagta 440
Query: 241 aaa 243
|||
Sbjct: 441 aaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no368_m05.g1 MSMg01no368_m05.g1 CHROMAT_FILE:
MSMg01no368_m05.g1 PHD_FILE: MSMg01no368_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:18 2005
(181 letters)
>mm_chr10_4533795_4534375
Length = 581
Score = 304 bits (157), Expect = 3e-87
Identities = 171/177 (96%), Gaps = 3/177 (1%)
Strand = Plus / Minus
Query: 4 tctctttacatttgtagaggcggggtgggggggggtgagattcataagccctgtgactct 63
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 449 tctctttacatttgtagaggcgg---ggggtggggtgagattcataaggtctgtgactct 393
Query: 64 agagaaccctaatatttgttaacattattttgggtctcctcaaggtttggaggtttcact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agagaaccctaatatttgttaacattattttgggtctcctcaaggtttggaggtttcact 333
Query: 124 ggcatttaaatgagtgaaatatcagtcatgctaacatgttttatccaactggaataa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggcatttaaatgagtgaaatatcagtcatgctaacatgttttatccaactggaataa 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
