Query= MSMg01no370_a08.b1 MSMg01no370_a08.b1 CHROMAT_FILE:
MSMg01no370_a08.b1 PHD_FILE: MSMg01no370_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:55 2005
(497 letters)
>mm_chr10_63587996_63588892
Length = 897
Score = 946 bits (489), Expect = 0.0
Identities = 492/493 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccctcaaaccaatctttctcgatttttcgctcctccgagagggagtgattgca 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcaccctcaaaccaatctttctcgatttttcgctcctctgagagggagtgattgca 264
Query: 65 aatagtctgtggccatttctgccctttcttttcctcatcatatgtccttaggtagcttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatagtctgtggccatttctgccctttcttttcctcatcatatgtccttaggtagcttcc 324
Query: 125 cacaaccccccgggaaacgtgaaaccccccgggacgtggtgtcattgtctcggtgagtca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacaaccccccgggaaacgtgaaaccccccgggacgtggtgtcattgtctcggtgagtca 384
Query: 185 ttgagttttattatctgaacatcttttgtccctcaccccttcatttcttatccttccata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgagttttattatctgaacatcttttgtccctcaccccttcatttcttatccttccata 444
Query: 245 ttaattattcagttatgtaacagactgctcccaaattactgctgtacaataaatgagagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaattattcagttatgtaacagactgctcccaaattactgctgtacaataaatgagagc 504
Query: 305 acatatattctaataatttctctgagtgtagaattttggagggacttagctgtgatgctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatatattctaataatttctctgagtgtagaattttggagggacttagctgtgatgctt 564
Query: 365 ctgacctgggacctcttataatgtggcatttaatgtgctctgtgcgattcagcatccaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgacctgggacctcttataatgtggcatttaatgtgctctgtgcgattcagcatccaaa 624
Query: 425 ggcttgactattccaggaagctctgccttcacagtggctcactcatggctattggaaagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggcttgactattccaggaagctctgccttcacagtggctcactcatggctattggaaagc 684
Query: 485 ctcaatttcttgt 497
|||||||||||||
Sbjct: 685 ctcaatttcttgt 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_a08.g1 MSMg01no370_a08.g1 CHROMAT_FILE:
MSMg01no370_a08.g1 PHD_FILE: MSMg01no370_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:55 2005
(415 letters)
>mm_chr10_63810322_63811136
Length = 815
Score = 752 bits (389), Expect = 0.0
Identities = 413/431 (95%), Gaps = 16/431 (3%)
Strand = Plus / Minus
Query: 1 ttaacccagggctcacatatgagtttcagaggatgtggaaggaggtctaaataagaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttaacccagggctcacatatgagtttcagaggatgtggaaggaggtctaaataagaacag 659
Query: 61 aactgctagaggcaggcaaatttctgagttcgaggccagcctggtctacagagtgagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aactgctagaggcaggcaaatttctgagttcgaggccagcctggtctacagagtgagttc 599
Query: 121 caggactgccagggctacaccgagaaaccctatcttgag----------------aaaaa 164
|||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 598 caggactgccagggctacacagagaaaccctatcttgagaaaaagaaaaaagaaaaaaaa 539
Query: 165 aaaaaaaaagaatggaactgctcatgagaggtctgagggctactagggaggtattctcta 224
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 538 aaaaaaaaagaatggaactgctcatgagaggtctgagggctactggggaggtattctcta 479
Query: 225 agggaccttctctgcctctagggaaaagctagaggctcttaatttataatgttataaaat 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agggaccttctctgcctctagggaaaagctagaggctcttaatttataatgttataaaat 419
Query: 285 actttaagaaaaaaatgcacttggctttgtctatcaaattgtatgggtatcaaggagctg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 actttaagaaaaaaatgcacttggctttgtctatcaaattgtatgggtatcaaggagctg 359
Query: 345 aaggggtttgcagctccataggaggaacaacaatatgaaataaccagtacccccagagtt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aaggggtttgcagctccataggaggaacaacaatatgaaataaccagtacccccagagtt 299
Query: 405 cccaccgacta 415
|||||||||||
Sbjct: 298 cccaccgacta 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
