Query= MSMg01no372_j24.b1 MSMg01no372_j24.b1 CHROMAT_FILE:
MSMg01no372_j24.b1 PHD_FILE: MSMg01no372_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:25 2005
(439 letters)
>mm_chr10_6220181_6221019
Length = 839
Score = 729 bits (377), Expect = 0.0
Identities = 428/459 (93%), Gaps = 26/459 (5%)
Strand = Plus / Minus
Query: 1 aaagcacaacactgaattgtttgtctttagaaatatgcttctttaaagtctccagaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaagcacaacactgaattgtttgtctttagaaatatgcttctttaaagtctccagaaaaa 444
Query: 61 tccaagaatgagaagagcctaatacttggcagaaaaagtccaactgcagagtcgtgtcct 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 443 tccaagaatgagaagagcctaatacttggcagaaaacgtccaactgcagagttgtgtcct 384
Query: 121 gaaactctgtcttctctaacaaagctggcttccaaagaaagtcacatcgtatgtgataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaactctgtcttctctaacaaagctggcttccaaagaaagtcacatcgtatgtgataaa 324
Query: 181 tttgaaatgttccctctatgacatcttttaaattcctgagaaatatccaactttgagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttgaaatgttccctctatgacatcttttaaattcctgagaaatatccaactttgagatg 264
Query: 241 gaaacctttctttttccaatttagcaaagattggtttaagattcactattatcctgcg-- 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 263 gaaacctttctttttccaatttagcaaagattggtttaagattcactattatcccgcgtc 204
Query: 299 ------------------cccccccaccccccacccccgtcccgtcccgtcccggggaga 340
||||||| |||||| ||||| ||| |||||||||||||||
Sbjct: 203 cccgtccccgtcccgtgtcccccccccccccc-ccccc--ccc--cccgtcccggggaga 149
Query: 341 aaaaaaaaacttttaatattaatataagtgattgcctagtccttaccaaggcagcaaatg 400
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 148 aaaaaaaa-cttttaatattaatataagtgattgcctattccttaccaaggcagcaaatg 90
Query: 401 tctgctcactttctggctttgtgctatcattttcagggg 439
|||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tctgctcactttctggctttgtgctatcattttcagggg 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_j24.g1 MSMg01no372_j24.g1 CHROMAT_FILE:
MSMg01no372_j24.g1 PHD_FILE: MSMg01no372_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:25 2005
(437 letters)
>mm_chr10_6044641_6045477
Length = 837
Score = 745 bits (385), Expect = 0.0
Identities = 424/437 (97%)
Strand = Plus / Plus
Query: 1 acagagttccaactttgcaggatcccccttaacatcagggcagaaggcggagctggccag 60
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acagagttccaactttacaggatcccccttaacatcagggcagaaggcagagctggccag 260
Query: 61 gaggaacacactgaggtctccatactaaagttttccctactctgcaaaaggcagcaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggaacacactgaggtctccatactaaagttttccctactctgcaaaaggcagcaggca 320
Query: 121 ccagcatttcttggcggttcttcgtcatgccggtggttgggatatacagaaaggggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagcatttcttggcggttcttcgtcatgccggtggttgggatatacagaaaggggagca 380
Query: 181 gacgtttactcctaatttagctcaatactggcaacatgtaaaaaacataaaaaccatcca 240
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gacgtttactactaatttagctcaatactggcaacacgtaaaaaacataaaaaccatcca 440
Query: 241 ccctaagaaaattcagtgactttgatacatctccatagagggattgctgtcttttctttt 300
|||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 441 ccctaagaaaattcagtggctttgagacatcttcatagagggattgctgtcttttctttt 500
Query: 301 taacccactcagaatgtattgaccgtccctttgcgcttttcaattctcttctgtgtgcca 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 taacccactcagaatgtattgaccatccctttgcgcttttcaattctcttctgtgtgcca 560
Query: 361 cgtttctgttgagaaggaattaacaagcaaaactgcttgtcttattttttgcagactgca 420
||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||
Sbjct: 561 cgtttctgttgagaaggaaataacaagtgaaaccgcttgtcttgttttttgcagactgca 620
Query: 421 tctaatgcaaaagcatt 437
|||||||||||||||||
Sbjct: 621 tctaatgcaaaagcatt 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
