Query= MSMg01no374_a08.b1 MSMg01no374_a08.b1 CHROMAT_FILE:
MSMg01no374_a08.b1 PHD_FILE: MSMg01no374_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:07 2005
(473 letters)
>mm_chr10_80374208_80375080
Length = 873
Score = 271 bits (140), Expect = 8e-77
Identities = 152/156 (97%)
Strand = Plus / Plus
Query: 4 ggaattctcagcaagtgttggccatgtgctaccttctgcccacgagctgcaacactgccc 63
||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 204 ggaattctcagcaagtgatggccatgtgctaccatctgcccatgagctgcaacactgccc 263
Query: 64 aaccctgaacatgagtgagactctgatgtgacagtgtggaaggacctagaagacatggtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaccctgaacatgagtgagactctgatgtgacagtgtggaaggacctagaagacatggtg 323
Query: 124 ctcaatgatactcagatgcaaagtccacttggtgtg 159
||||||||||||||||||||||||||||| ||||||
Sbjct: 324 ctcaatgatactcagatgcaaagtccactcggtgtg 359
Score = 203 bits (105), Expect = 2e-56
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 369 gggtgtataagctcaacacacatcagggctcagagacctggtatctgtcagcacagagat 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gggtgtataagctcaacacacatcagggctcagagacctggtatctgtcagcacagagat 418
Query: 429 ggtggctgcccagcatgggcctggcaggtcagccaaggccagagt 473
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggtggctgcccagcatgggcctggcaggtcagccaaggccagagt 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_a08.g1 MSMg01no374_a08.g1 CHROMAT_FILE:
MSMg01no374_a08.g1 PHD_FILE: MSMg01no374_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:07 2005
(455 letters)
>mm_chr10_80556111_80556965
Length = 855
Score = 880 bits (455), Expect = 0.0
Identities = 455/455 (100%)
Strand = Plus / Minus
Query: 1 tctccatcccttcacctcaggctgtgcccagggtctcagccctgtgctgcacccccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tctccatcccttcacctcaggctgtgcccagggtctcagccctgtgctgcacccccttct 596
Query: 61 gatgcagtcagtggttgctaatgtgttttcttgctgcctaggtgttcgcttataccccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gatgcagtcagtggttgctaatgtgttttcttgctgcctaggtgttcgcttataccccct 536
Query: 121 cccccatagactgtcatctcaagggcagtttctcgctcctcttccctcccccttcctcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cccccatagactgtcatctcaagggcagtttctcgctcctcttccctcccccttcctcgt 476
Query: 181 gctccagccacagaacagtcctccgtgctccttcagtgcccgaagctccatgctgcccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gctccagccacagaacagtcctccgtgctccttcagtgcccgaagctccatgctgcccca 416
Query: 241 ggctttgcacaggttacctcttcagcctaaagcgccttccagctgctcttctcagttgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggctttgcacaggttacctcttcagcctaaagcgccttccagctgctcttctcagttgac 356
Query: 301 ccagtctcccttccaggactctgggtgaccctgagtccttgctttggagtcattcggtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccagtctcccttccaggactctgggtgaccctgagtccttgctttggagtcattcggtat 296
Query: 361 cttgatggcatttctctctcaagttgtactcatctctctacccaactcagtccaggacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cttgatggcatttctctctcaagttgtactcatctctctacccaactcagtccaggacgc 236
Query: 421 tcgtagatcgattggccatgcctaaaccagtagct 455
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tcgtagatcgattggccatgcctaaaccagtagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
