Query= MSMg01no374_h07.b1 MSMg01no374_h07.b1 CHROMAT_FILE:
MSMg01no374_h07.b1 PHD_FILE: MSMg01no374_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:42 2005
(528 letters)
>mm_chr10_105093341_105094269
Length = 929
Score = 1015 bits (525), Expect = 0.0
Identities = 528/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Plus
Query: 1 tcccattaaaagggagaattgacagattctgtgtcgatgggtagatggagaaatgtttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccattaaaagggagaattgacagattctgtgtcgatgggtagatggagaaatgtttga 260
Query: 61 gaaacaaattagagttaatactcaggttccaacttacacagctttgacgagcacagccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacaaattagagttaatactcaggttccaacttacacagctttgacgagcacagccct 320
Query: 121 ccttcaccccccc-actcccccgaaaaaagctcttccgagaggaggacaacaaatttggc 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttcaccccccccactcccccgaaaaaagctcttccgagaggaggacaacaaatttggc 380
Query: 180 tttttaacaggctgagcttatataacaggtagaatatctaagagcaagtataagctctgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttaacaggctgagcttatataacaggtagaatatctaagagcaagtataagctctgc 440
Query: 240 taggaataaagaagcatatagctttcttaaagaaaagagctataaggactccatgtctat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggaataaagaagcatatagctttcttaaagaaaagagctataaggactccatgtctat 500
Query: 300 agggtcaaatagtttttaaacttctaccactcatcttcttgacgagtgcaagccagtagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggtcaaatagtttttaaacttctaccactcatcttcttgacgagtgcaagccagtagt 560
Query: 360 tcaaactttctcatgattcttgaatctttcagtgcatactttgctatggagcttaataac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaaactttctcatgattcttgaatctttcagtgcatactttgctatggagcttaataac 620
Query: 420 agcataagcatggtttcagttggcatgattccagctaccaagattatggagttaaaaata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcataagcatggtttcagttggcatgattccagctaccaagattatggagttaaaaata 680
Query: 480 tatccccacaggcctttcacacatcagctgtctcacaagcaccactaaa 528
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatccccacaggcctttcacacatcagctgtctcacaagcaccactaaa 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 929
Length adjustment: 10
Effective length of query: 518
Effective length of database: 919
Effective search space: 476042
Effective search space used: 476042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_h07.g1 MSMg01no374_h07.g1 CHROMAT_FILE:
MSMg01no374_h07.g1 PHD_FILE: MSMg01no374_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:42 2005
(440 letters)
>mm_chr10_105233391_105234230
Length = 840
Score = 820 bits (424), Expect = 0.0
Identities = 436/440 (99%)
Strand = Plus / Minus
Query: 1 attatttttggcaactgttgtttaataacaatttgtgaaaaatatgataaaggtatgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 attatttttggcaactgttgtttaataacaatttgtgaaaaatatgataaaggtatgaac 778
Query: 61 taggtatgctattctctgattacttcaggtaattgttttcacatctccattattactagg 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 777 taggtatgctattctctgattacttcaggtaatcattttcacatctccattattactagg 718
Query: 121 aattgttactaagtaaccaattctatgaactaagtatgctagtcttcctacgtttcagat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aattgttactaggtaaccaattctatgaactaagtatgctagtcttcctacgtttcagat 658
Query: 181 agggaaaccgggcatagccacgtgaagagagcatccgttttacatgcagcatcatagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agggaaaccgggcatagccacgtgaagagagcatccgttttacatgcagcatcatagaaa 598
Query: 241 agtttacacatggctgttttatttatgatatgaagtgcatcaactacaggtcttaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agtttacacatggctgttttatttatgatatgaagtgcatcaactacaggtcttaaacat 538
Query: 301 agaattagttcagtactttattatatataccttcacagtgtctatatatttgtaaaagtc 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 537 agaattagttcagtactttattatatatagcttcacagtgtctatatatttgtaaaagtc 478
Query: 361 ttttcataatctattttttaatagaataggaaattattaaactgtttaatttagtcagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttttcataatctattttttaatagaataggaaattattaaactgtttaatttagtcagaa 418
Query: 421 atgttattttgtttgattta 440
||||||||||||||||||||
Sbjct: 417 atgttattttgtttgattta 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
