Query= MSMg01no379_i09.b1 MSMg01no379_i09.b1 CHROMAT_FILE:
MSMg01no379_i09.b1 PHD_FILE: MSMg01no379_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:19 2005
(165 letters)
>mm_chr10_104936678_104937242
Length = 565
Score = 277 bits (143), Expect = 3e-79
Identities = 155/159 (97%)
Strand = Plus / Minus
Query: 5 atctttggttacccacgtctctcccctgtactcctgccatacagcaaagcttcaaagaag 64
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 atctttggatacccacgtctctcccctgtactcctgccatacagcaaagcctcaaagaag 256
Query: 65 ccaacactgtagtagtgaactacactctaaaccttattccattgtctaggactctttgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 255 ccaacactgtagtagtgaactacactctaaaccttattccattgtctaggaatctttgga 196
Query: 125 gacaggagtctcatgcattccaggctgacctctaattgg 163
||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aacaggagtctcatgcattccaggctgacctctaattgg 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no379_i09.g1 MSMg01no379_i09.g1 CHROMAT_FILE:
MSMg01no379_i09.g1 PHD_FILE: MSMg01no379_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:19 2005
(616 letters)
>mm_chr10_104810777_104811796
Length = 1020
Score = 1093 bits (565), Expect = 0.0
Identities = 605/623 (97%), Gaps = 12/623 (1%)
Strand = Plus / Plus
Query: 1 ttaaa-tctcttattcaggaataacaacatattgtaaaatagataatgaattggtattta 59
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaaattct-ttattcaggaataacaacatattgtaaaatagataatgaattggtattta 259
Query: 60 agaaattaccagctaaggctacacagagaaactctcaaacaaccgcaaaggaaggaaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaaattaccagctaaggctacacagagaaactctcaaacaaccgcaaaggaaggaaaag 319
Query: 120 aaaggggg-------ggggggagattacagtgaaaatgtatactccatttaaagctaaaa 172
|||||||| ||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 320 aaagggggtgggggggggggga-attacagtgaaaatgtatactccatataaagctaaaa 378
Query: 173 accaagaactggaaacaaatgccactgaaattacttaaaaagagtaatcaaagaggttgg 232
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 accaagaactggaaaca--tgccactgaaattacttaaaaagagtaatcaaagaggttga 436
Query: 233 gtaaagagatattgtttagtcctggtggaaaaactgaaaacatacagaaaaggtaacagc 292
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtaaagagatattgtatagtcctggtggaaaaactgaaaacatacagaaaaggtaacagc 496
Query: 293 ttgtatcacctatagttggtaaatatgtgtttgctacatgtaagctaataaaaaaaatgt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgtatcacctatagttggtaaatatgtgtttgctacatgtaagctaataaaaaaaatgt 556
Query: 353 atcgtcttaaatgcaaagacaataatgcaacgactcataaagccacaaaattagaacaag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 557 atcgtcttaaatgcaaagacaataatgcaacgactcataaagccacaaaattaaaacaag 616
Query: 413 ataattttttaaaattctatagagtagtatagtcataaagtttagtcggcccttatgctt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ataattttttaaaattctatagagtagtatagtcataaagtttagtcggcccttatgctt 676
Query: 473 agaagccatgaggcaattaaggggaaattatgtccagtgcagttgtgcacatactcaata 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agaagccatgaggcaattaaggggaaattatgtccagtgcagttgtgcacatactcaata 736
Query: 533 tgaataactacacggtaatgaaaccaagtcagcctgcagcggcacagctagcgagagtca 592
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 737 tgaataactacacggtaatgaaaccaagtcggcctgcagcggcacagctagcgagagtca 796
Query: 593 cggtgcaaaatatgcggagtatg 615
||| |||||||||||||||||||
Sbjct: 797 cggcgcaaaatatgcggagtatg 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1020
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1010
Effective search space: 612060
Effective search space used: 612060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
