Query= MSMg01no382_f10.b1 MSMg01no382_f10.b1 CHROMAT_FILE:
MSMg01no382_f10.b1 PHD_FILE: MSMg01no382_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:03 2005
(488 letters)
>mm_chr10_67158172_67159059
Length = 888
Score = 913 bits (472), Expect = 0.0
Identities = 484/488 (99%)
Strand = Plus / Plus
Query: 1 tttcaataaggataagaggcccttatgatgctaaaagcattagacttcagagaaagaaga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaataaggataagaggcccttacgatgctaaaagcattagacttcagagaaagaaga 260
Query: 61 ggcgaagtcaggtaagctaggggtgaaaaggaaaagatgtgttcagtgggacaaatactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcgaagtcaggtaagctaggggtgaaaaggaaaagatgtgttcagtgggacaaatactc 320
Query: 121 agggccatgaaggctgcttcagctcggcctaacgccgtctcaggtggacatcattgactt 180
|||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 321 agggccatgaaggctgcttcagctcggcctaatgccgtctcaggtggccgtcattgactt 380
Query: 181 gcctctgtacgctcttagaagctgcagaccttttccacttgccagagtatgtcttcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctctgtacgctcttagaagctgcagaccttttccacttgccagagtatgtcttcaatt 440
Query: 241 ttacgccatgcaagaagcaccataggcaggcgtttgcttagatgggtgctggatacatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacgccatgcaagaagcaccataggcaggcgtttgcttagatgggtgctggatacatcc 500
Query: 301 agatggttctctggttgttgggaaaagtgctaagcctgaccagagagttatctcctcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatggttctctggttgttgggaaaagtgctaagcctgaccagagagttatctcctcacc 560
Query: 361 acagaagggaaaaaccaatccaggggcaagcgtgcaactgagtatcctccccaagataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagaagggaaaaaccaatccaggggcaagcgtgcaactgagtatcctccccaagataaa 620
Query: 421 gtctacttcctgagagaaacactcacttcttcttgagaaactcttgcccaaccagagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctacttcctgagagaaacactcacttcttcttgagaaactcttgcccaaccagagtca 680
Query: 481 gtgactgg 488
||||||||
Sbjct: 681 gtgactgg 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_f10.g1 MSMg01no382_f10.g1 CHROMAT_FILE:
MSMg01no382_f10.g1 PHD_FILE: MSMg01no382_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:03 2005
(457 letters)
>mm_chr10_67351023_67351882
Length = 860
Score = 812 bits (420), Expect = 0.0
Identities = 449/460 (97%), Gaps = 3/460 (0%)
Strand = Plus / Minus
Query: 1 ttcagaccagccaagaagggggaacacctgggtctgagccggaaagggaatttcaggccc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttcagaccagccaagaaaggggaacacctgggtctgagccggaaagggaatttcaggccc 601
Query: 61 aaaatggctaaaaagaagcctacagcaatcgtgaatatcatctagagcttgggtggctcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaaatggctaaaaagaagcctacagcaatcgtgaatatcatctagagcttgggtggctcg 541
Query: 121 gaagcatcaccacggggcttaccaaatgatgttccagggtccaacagtgttgtccttttg 180
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 540 gaagcatcaccacggggcttaccaaatgatgttccagagtccaacagcgttgtccttttg 481
Query: 181 gacatgtagccgtaggaacgcagggaacacaacaaacagggtcactctgattaaccagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gacatgtagccgtaggaacgcagggaacacaacaaacagggtcactctgattaaccagaa 421
Query: 241 tgtaaaacagccggtttcaggaaacacgaaccggtaacttcttaaataattgggccagtc 300
||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 420 tgtaaaacaaccggtttcaggaaacacgagcgggtaacttcttaaataattgggccagtt 361
Query: 301 tctcgcagacctggcacccggggttcctctacccagtgcccattagtacgtgggcctcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctcgcagacctggcacccggggttcctctacccagtgcccattagtacgtgggcctcac 301
Query: 361 aagatgccagactctggtatccactgctctctgaattatgaggcaaggaatgtgactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagatgccagactctggtatccactgctctctgaattatgaggcaaggaatgtgactgtg 241
Query: 421 aag---ttctactttaaagaaaaatattattttttggtgt 457
||| |||||||||||||||||||| |||||||||||||
Sbjct: 240 aagttcttctactttaaagaaaaatagtattttttggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 860
Length adjustment: 10
Effective length of query: 447
Effective length of database: 850
Effective search space: 379950
Effective search space used: 379950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
