Query= MSMg01no383_f08.b1 MSMg01no383_f08.b1 CHROMAT_FILE:
MSMg01no383_f08.b1 PHD_FILE: MSMg01no383_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:22 2005
(514 letters)
>mm_chr10_65731346_65732258
Length = 913
Score = 897 bits (464), Expect = 0.0
Identities = 500/512 (97%), Gaps = 3/512 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttaaa-atccaataaaaacataaaatacaccactgaagaaaagaatgaagga 62
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggaattc-ttaaacatccaataaaaacataaaatacaccactgaagaaaagaatgaagga 484
Query: 63 tgctaaggcaaacaataaacagtattaaaaatgaaataagaccataaaatagataaagtg 122
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 483 tgctaaggcaaacaaaaaacagtattaaaaatgaaataagtccataaaatagataaagtg 424
Query: 123 tgtgaataggtagaggaaaaagacgctttgaagagattatgatgaggcagtgtcagagga 182
|||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 423 tgtgaataggtagagg-aaaagatgctttaaagagattatgatgagacagtgtcagagga 365
Query: 183 tggtgactgggaagaagtgaggatgttttgtctttcaaattgtgcacgcagtatctctcc 242
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tggtggctgggaagaactgaggatgttttgtctttcaaattgtgcacgcagtatctctcc 305
Query: 243 atcagggatgtacaagctctcctgtacagttaaagttcatgttctgtggtttcctgtata 302
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 304 atcagggatgtacaagctctcctgtacagttaaaattcatgttctgtgatttcctgtata 245
Query: 303 tataccatgggaaatctctactggccagctgtatctaaagattctgttcatttagagggt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tataccatgggaaatctctactggccagctgtatctaaagattctgttcatttagagggt 185
Query: 363 cttgttttcctggtgtcctccatcccctctgattcttacacctttttggtctcctcttcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cttgttttcctggtgtcctccatcccctctgattcttacacctttttggtctcctcttcc 125
Query: 423 tcatggagccaagaggggagagatttgatagagacatcccattttgagccgagtgttcca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tcatggagccaagaggggagagatttgatagagacatcccattttgagccgagtgttcca 65
Query: 483 aggtctctcattctgtgcatattgcctggctg 514
||||||||||||||||||||||||||||||||
Sbjct: 64 aggtctctcattctgtgcatattgcctggctg 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space: 455112
Effective search space used: 455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_f08.g1 MSMg01no383_f08.g1 CHROMAT_FILE:
MSMg01no383_f08.g1 PHD_FILE: MSMg01no383_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:22 2005
(303 letters)
>mm_chr10_65565210_65565912
Length = 703
Score = 578 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 1 tctagtggtagatgcaatatggcttccaactaagtggggcaaaatgtaagtgctaaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagtggtagatgcaatatggcttccaactaagtggggcaaaatgtaagtgctaaggtt 260
Query: 61 tttcccgtatgggcagaaaatgggttgacacaacataccagaaactctgtacaggaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcccgtatgggcagaaaatgggttgacacaacataccagaaactctgtacaggaagat 320
Query: 121 ctcactttcactacaatgaagaaagccaacatctagggctcagtcagtaggttattttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcactttcactacaatgaagaaagccaacatctagggctcagtcagtaggttattttaa 380
Query: 181 tattcctattgaacacgcaagttggcatgtgatctaacattgaactgtttcttttatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattcctattgaacacgcaagttggcatgtgatctaacattgaactgtttcttttatatt 440
Query: 241 tgtgtatggatgcctgtttgtgtttagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtatggatgcctgtttgtgtttagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
