Query= MSMg01no384_c08.b1 MSMg01no384_c08.b1 CHROMAT_FILE:
MSMg01no384_c08.b1 PHD_FILE: MSMg01no384_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(533 letters)
>mm_chr10_114995866_114996797
Length = 932
Score = 924 bits (478), Expect = 0.0
Identities = 517/530 (97%), Gaps = 1/530 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcttttgtacaccttgctgccccagcaatggcaaatataagccaccacctttg 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ggaattctcttttgtccaccttgctgccccagcaatggcaaatataagccaccacctttg 809
Query: 64 gctttttacatgggtcctggtggtaaaactcgagtccccaagcttacaaagcaagcattt 123
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gctttttacatgggtcctgacagtaaaactcgagtccccaagcttacaaagcaagcattt 749
Query: 124 caccaactgaatcatccaaaccctccttgccactctgtgatgtaacgtttaatacctgca 183
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 748 caccaactgaaccatccaaaccctccttgccactctgtgatgtaacgtttaaaacctgca 689
Query: 184 tcagagatggctgcttagcatttcatccatctctctgattatcatgaccttcttgtagaa 243
||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 688 tcagagatggctgcttagcatctcatccatctctctgattatcataaccttcctgtagaa 629
Query: 244 gtcaaggagatcccgtccatctgtccagtgctgtttattagctgcatgccgttcagggat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtcaaggagatcccgtccatctgtccagtgctgtttattagctgcatgccgttcagggat 569
Query: 304 aattagtgacttccagaaatatcttaaaattatatttttatgatatgattaaagctggta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aattagtgacttccagaaatatcttaaaattatatttttatgatatgattaaagctggta 509
Query: 364 tgtcatttgatgacagtttagcaggtcacgtgacaatgccatgaacagtcatttcagttg 423
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 508 tgtcaattgatgacagtttagcaggtcacgtgacaatgccatgaacagttatttcagttg 449
Query: 424 ccagaatcctaaatattgtacccagaaaccacttttttctttcatgagaattatgtatct 483
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 448 ccagaatcctaaatattgtacccagaaactacttttt-ctttcatgagaattatgtatct 390
Query: 484 catcctctagtaaggtctcctaaatggatgtcttttaacttcctgaggca 533
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catcctctagtaaggtctcctaaatggatgtcttttaacttcctgaggca 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_c08.g1 MSMg01no384_c08.g1 CHROMAT_FILE:
MSMg01no384_c08.g1 PHD_FILE: MSMg01no384_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(365 letters)
>mm_chr10_114830331_114831095
Length = 765
Score = 667 bits (345), Expect = 0.0
Identities = 351/353 (99%), Gaps = 1/353 (0%)
Strand = Plus / Plus
Query: 8 ttttttttttttttt-cacatttccttttattcacaaactaattgagtactttattccag 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tttttttttttttttccacatttccttttattcacaaactaattgagtactttattccag 266
Query: 67 gctattgcaagtgttaatgaacaaaataattgtttatgcctccataggtttgcttttatt 126
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gctattgcaactgttaatgaacaaaataattgtttatgcctccataggtttgcttttatt 326
Query: 127 ttgtacttaatgttttctagccttgtttcattctgctgcctaggctcatctctgatgcct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttgtacttaatgttttctagccttgtttcattctgctgcctaggctcatctctgatgcct 386
Query: 187 aggctcacgcaatcatcccacttgagaatctgggtctatagatgtgtaatactgcaccct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aggctcacgcaatcatcccacttgagaatctgggtctatagatgtgtaatactgcaccct 446
Query: 247 aaaggtcactatgacatcagacacttgcatctcagaaagaaacatagcacacatgatgag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaggtcactatgacatcagacacttgcatctcagaaagaaacatagcacacatgatgag 506
Query: 307 caaattagtatgaaagaagtattagcagggtaagtaggatgggagtagggtat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caaattagtatgaaagaagtattagcagggtaagtaggatgggagtagggtat 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
