Query= MSMg01no384_m04.b1 MSMg01no384_m04.b1 CHROMAT_FILE:
MSMg01no384_m04.b1 PHD_FILE: MSMg01no384_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:08 2005
(544 letters)
>mm_chr10_126902452_126903394
Length = 943
Score = 752 bits (389), Expect = 0.0
Identities = 404/409 (98%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 136 tctttctcctttttccacttccttttaaggtttatttttattgatacgtatgtgtgtatc 195
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 943 tctttctcctttttccacttccttttaagatttatttttattgatacgtatgtgtgtatc 884
Query: 196 tttgtgtggagtgtcactgcttgtggaggccaggggtcatccgatcccctgcgattcacc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 883 tttgtgtggagtgtcactgcttgtggaggccaggggtcatccgatcccctgcgattcgcc 824
Query: 256 tgatgtgaatgttgcaaaggagctaaggccttctgtaggagtggcgcacactggcaacca 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tgatgtgaatgttgcaaaggagctaaggccttctgtaggagtggcgcacactggcaacca 764
Query: 316 ctgagcatctcagcttcagcaaggccaacaggtgaggacaactagagctttaaagtgaga 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ctgagcatctcagcttcagcaaggccaacaggtgaggacaactagagctttaaagtgaga 704
Query: 376 cctatattctgagtctcctatcgcactcagttagtactgagatatggtattaaacactca 435
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 703 cctatattctgagtctcctatcgcactcagttagtactgagatatggtgttaaacactca 644
Query: 436 ggccctctgcactctgcagctttcctgttggtaaatcaggagaacagatttacagtgagt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ggccctctgcactctgcagctttcctgttggtaaatcaggagaacagatttacagtgagt 584
Query: 496 tggcgccagcataaaagtattcctctcacatccatcctatattatccct 544
||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 583 tggtgccagcataaa-gtattcctctcacatccatcctatattatccct 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_m04.g1 MSMg01no384_m04.g1 CHROMAT_FILE:
MSMg01no384_m04.g1 PHD_FILE: MSMg01no384_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:08 2005
(576 letters)
>mm_chr10_126730454_126731429
Length = 976
Score = 969 bits (501), Expect = 0.0
Identities = 525/533 (98%), Gaps = 2/533 (0%)
Strand = Plus / Plus
Query: 45 ttagaaaggatctagagaagggctaggaggaggctggaggtaaaggactgtttcttcctt 104
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 245 ttagaaaggatctagagaagggctaggaggaggctggaggtaaaggactgttttttcctt 304
Query: 105 ttctccacagtgttccagaaggaagtgcatcttcatacaccaccacacctgaaagcaggt 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttctccacagtgttccagaaggaagtgcatcttcatacaccaccacacctgaaagcaggt 364
Query: 165 aatcttggccaccctctcagtcagctgcgaatgctgttcatgttgctttgctgggggaag 224
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 365 aatcttggccaccctctcagtcagctgcgaatgctgctcatgttgctttgctggggg-ag 423
Query: 225 agttagacaaggccttcatctgaacgagcttttgctgtcagaccatgtctttctctgacc 284
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 424 agttagacaaggccttcatctgaacaagcttttgctgtcagaccatgtctttctctgacc 483
Query: 285 ccataatgttgtttgagagctggcttttgaagtcagcctcaacaatggcaattgctttgt 344
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 484 ccataatgttgtttgagagctggctttcgaagtcagcctcaacaatggcaattggtttgt 543
Query: 345 cttcccaactctcagtccacaccaagattagacccaaaggaccttttgcccaagcttccc 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cttcccaactctcagtccacaccaagattagacccaaaggaccttttgcccaagcttccc 603
Query: 405 acacgagagaaaaag-gagtacaaatggcctggtaattgcccctggaaattaccagtagt 463
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acacgagagaaaaaaagagtacaaatggcctggtaattgcccctggaaattaccagtagt 663
Query: 464 gttcccaagagagttgaatacttttactgtaatcctgtaagaatatatatgtatagccaa 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gttcccaagagagttgaatacttttactgtaatcctgtaagaatatatatgtatagccaa 723
Query: 524 gcccagtgactgttcctctctcagaacttgagaggatcctgaagttatctgta 576
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gcccagtgactgttcctctctcagaacttgagaggatcctgaagttatctgta 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
