Query= MSMg01no384_o17.b1 MSMg01no384_o17.b1 CHROMAT_FILE:
MSMg01no384_o17.b1 PHD_FILE: MSMg01no384_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:20 2005
(497 letters)
>mm_chr10_8655397_8656293
Length = 897
Score = 876 bits (453), Expect = 0.0
Identities = 486/497 (97%)
Strand = Plus / Plus
Query: 1 ggagattcaaaacagagccacgtgatgttctgggtgggaccagctagctgctcagttctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagattcaaaacagagccacgtgatgttctgggtgggaccagctagctgctcagttctt 260
Query: 61 ttcttgcaatgctcagatagtgttgttttctgtgaggacagcaggggactgactcagtgt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttgctatgctcagatagtgttgttttctgtgaggacagcaggggactgactcagtgt 320
Query: 121 gacacactccttagtcaagccagcctcaagagtttctcaacctgtaggtcctgaacactt 180
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gacccactccttagtcaagccagcctcaagagtttctcaacctgtaggtcctgaaccctt 380
Query: 181 tgagagttcacatatcagatatcctgcatattacaattgataacagtatcacaattacag 240
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggggttcacatatcagatatcctgcatattacaattgataacagtatcacaattacag 440
Query: 241 atatgaagcgggattacagatatgaaatcattttatggttggggtcaccacaatatgagg 300
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 atatgaagcgaaattacagatatgaaataattttatggttggggtcaccacaatatgagg 500
Query: 301 aactgtattaagcatcaggaacactgcgaaccactgctttaaaggcaggtgagagcagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactgtattaagcatcaggaacactgcgaaccactgctttaaaggcaggtgagagcagtg 560
Query: 361 tgcctttatggctatcaggtttatatttatatatttttataactttaggatctgttctta 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcctttatggctgtcaggtttatatttatatatttttataactttaggatctgttctta 620
Query: 421 tcaagggctttaccttcgtatatgctataaccagattttatactgttttatttcttggag 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 tcaagggctttaccttcgtatatgctataaccagattttatactgttatatttcttggag 680
Query: 481 tttccttttgtatttag 497
|||||||||||||||||
Sbjct: 681 tttccttttgtatttag 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_o17.g1 MSMg01no384_o17.g1 CHROMAT_FILE:
MSMg01no384_o17.g1 PHD_FILE: MSMg01no384_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:20 2005
(592 letters)
>mm_chr10_8817097_8818090
Length = 994
Score = 1007 bits (521), Expect = 0.0
Identities = 573/591 (96%), Gaps = 4/591 (0%)
Strand = Plus / Minus
Query: 1 actttagctccccatttctttaatatatcagccaagctcatcacaactaggcaagcttac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 612 actttagctccccatttctttaatatatcagccaagctcatcacaaccaggcaagcttac 553
Query: 61 aaagtttaaagtgacgagcttgctttaatagattggatgaacagacaagtttctctcaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 552 aaagtttaaagtgacgagcttgctttaatagattggatgaacagacaagtttctctcatt 493
Query: 121 ggaatttaaagacaaatgggagcgtttccaggctcgacttctgcaggctactgtgtgatc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggaatttaaagacaaatgggagagtttccaggctcgacttctgcaggctactgtgtgatc 433
Query: 181 agaacatgtttttacacaacg-acggtgttgtaagttccaatataatttggtaagacatc 239
||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||
Sbjct: 432 agaacatgtttttacacaa-gaatggtgttgtaagttccaatataatttggtaagatatc 374
Query: 240 attttcagtatgttgccagcaacatgttgagaagtttccaactgaagaaaccaa--tcat 297
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 373 attttcggtatattgccagcaacatgttgagaagtttccaactgaagaaaccaatctcat 314
Query: 298 tcctcccatgtgtgtatagacagacagacaagcatctttttttctgcgttggtcttctgc 357
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 313 tcctcccatgtgtgtatagacagacagacaagcatctctttttctgcgttggtcttctgc 254
Query: 358 ttgcgcattggtacatagaggatgcccacgtccagagctgcactgatggctgtcacacac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgcgcattggtacatagaggatgcccacgtccagagctgcactgatggctgtcacacac 194
Query: 418 tgagcggcttaagcaacagaactctattttctcaccactctggaacatggaagaccaaga 477
||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 193 tgagcagcttaagcaacagaactttattttatcaccactctggaacatggaagaccaaga 134
Query: 478 tcaagatgccctcagctttgagtttttcttcctctttggcttgtagatagccatgttctt 537
|||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||
Sbjct: 133 tcaagatgccctcagctttgaggttttcttcctccttggcttgtagatggccatgttctt 74
Query: 538 gctgtgtcttcatggtctttcctctgggtgtgcagcctgctgtgtctgttt 588
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctgtgtcttcatggtctttcctctgggtgtgcagcctgctgtgtctgttt 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 994
Length adjustment: 10
Effective length of query: 582
Effective length of database: 984
Effective search space: 572688
Effective search space used: 572688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
