Query= MSMg01no386_a09.b1 MSMg01no386_a09.b1 CHROMAT_FILE:
MSMg01no386_a09.b1 PHD_FILE: MSMg01no386_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:45 2005
(674 letters)
>mm_chr10_95473649_95474722
Length = 1074
Score = 1249 bits (646), Expect = 0.0
Identities = 664/670 (99%)
Strand = Plus / Minus
Query: 5 gaattccagtcacattaccgacaataagtcacatataattatgagcaagcagtgcatatt 64
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 gaattccagtcacataaatgacaataagtcacatataattatgagcaagcagtgcatatt 865
Query: 65 ttgtacctgttttccttttcccttgagaacacagcagtcctgagttgaggcggtagtaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttgtacctgttttccttttcccttgagaacacagcagtcctgagttgaggcggtagtaac 805
Query: 125 tgagcagtttaagagcactgtctgctctcccaaggaatctgagtttgactcccagcaccc 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 804 tgagcagtttaagagcactgtctgctctcccaaggaatctgggtttgactcccagcaccc 745
Query: 185 acatggcagctgacaaccatctgtgaatccctcttctggaccctacaggtatcaggcacg 244
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 744 acatggcagctgacaatcatctgtgactccctcttctggaccctacaggtatcaggcacg 685
Query: 245 cttgtgccagcaaaatactcatatacgaataataatacatttttaaaaatacaggagatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cttgtgccagcaaaatactcatatacgaataataatacatttttaaaaatacaggagatc 625
Query: 305 aaggtgagggatttaagttataaaatgaaacttaaaaattatgacattcaaggcacattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaggtgagggatttaagttataaaatgaaacttaaaaattatgacattcaaggcacattt 565
Query: 365 agacacattcctttgaacttcccatgacgatttttgttacttttccatagttaagaacta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agacacattcctttgaacttcccatgacgatttttgttacttttccatagttaagaacta 505
Query: 425 ccacacttgacttaatttttttaattatatttttaaaattattatttaaagttttatttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccacacttgacttaatttttttaattatatttttaaaattattatttaaagttttatttc 445
Query: 485 attcgtacagttattttgcttgcatgtgtatctgtgcaccatgtgtgtgcctggtgccca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attcgtacagttattttgcttgcatgtgtatctgtgcaccatgtgtgtgcctggtgccca 385
Query: 545 ggaggcaagaagagggtatcggatctcttaaaactggtgttaaggtggttgtgcgttgtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaggcaagaagagggtatcggatctcttaaaactggtgttaaggtggttgtgcgttgtc 325
Query: 605 aggtggatgctgggaacccaaccaaggtcctctggaagagcaagcagtgttcttaatgac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggtggatgctgggaacccaaccaaggtcctctggaagagcaagcagtgttcttaatgac 265
Query: 665 tgaacctggt 674
||||||||||
Sbjct: 264 tgaacctggt 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_a09.g1 MSMg01no386_a09.g1 CHROMAT_FILE:
MSMg01no386_a09.g1 PHD_FILE: MSMg01no386_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:45 2005
(634 letters)
>mm_chr10_95341759_95342793
Length = 1035
Score = 1067 bits (552), Expect = 0.0
Identities = 597/618 (96%), Gaps = 12/618 (1%)
Strand = Plus / Plus
Query: 1 aagtcatctctctgaaaacaactcattccataggtgtcctccgtgtatacatgaagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcatctctctgaaaacaactcattccataggtgtcctccgtgtatacatgaagcaga 260
Query: 61 catgcaggcaacacgcctatagctccagaaaccgagacaggaggatgggtgtgggttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgcaggcaacacgcctatagctccagaaaccgagacaggaggatgggtgtgggttcaa 320
Query: 121 ggctagcctaggatacccagtgagagttggttccagactagccagtactacataatcaga 180
||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ggctagcctgggttacccagtgagagttggttccagactagccagtactacatagtcaga 380
Query: 181 ccatatccctgaaagaaaagaacaataatcaacagcttcgatctgatctgttattctctg 240
|| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||
Sbjct: 381 ccgtatccctgaaagaaaagaacaataatcaatagcttcggtctgatctcttattctctg 440
Query: 241 aactctattttt------caaatcacaacagcagtggtttgaatatgtgcctagttttca 294
||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 aactcta-----aaaacacaaatcacaacagcagtggtttgaatatgcgcctagttttca 495
Query: 295 tgtgtcagaaacgtagtggtttgaatgagaatggcccacagagactcatatatttgaatg 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgtgtcagaaacgtagtggtttgaatgagaatggcccacagagactcatatatttgaatg 555
Query: 355 tttagtccccagttggtggaactgtttaggaaggatgggtagatgtagccttattgaaag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttagtccccagttggtggaactgtttaggaaggatgggtagatgtagccttattgaaag 615
Query: 415 aagtgtgtcactgtggttgggcttggggtttcaaacacctactgacattcccaatgcatt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aagtgtgtcactgtggttgggcttggggtttcaaacacctactgacattcccaatgcatt 675
Query: 475 ctctgcctcctacttgtggattgagagatgtgagcttcagctgccgctccagccacttgc 534
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 676 ctctgcctcctacttgtggattgagagacgtgagcttcagctgccgctccagccacttgc 735
Query: 535 tgccgtgcctttgcttgtccatcataactctaaccctctaattaaactctttttt-aatt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 736 tgccgtgcctttgcttgtccatcataactctaaccctctaattaaactctttttttaatt 795
Query: 594 tttttaaaaaataaattg 611
||||||||||||||||||
Sbjct: 796 tttttaaaaaataaattg 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
