Query= MSMg01no388_c24.b1 MSMg01no388_c24.b1 CHROMAT_FILE:
MSMg01no388_c24.b1 PHD_FILE: MSMg01no388_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:28 2005
(481 letters)
>mm_chr10_111315112_111315992
Length = 881
Score = 886 bits (458), Expect = 0.0
Identities = 473/478 (98%)
Strand = Plus / Plus
Query: 4 ggaattcattttgtatgtgttaggagacaggcaattaagatcctgtttggtttccaaatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattttgtatgtgttaggagacaggcaattaagatcctgtttggtttccaaatg 263
Query: 64 gatattccgcttagccggagtcattaatcaccaaggagtttcctccaggagtcttcagca 123
||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 gatgttccgcttagccggagccattaatcaccgaggagtttcctccaggagtcttcagca 323
Query: 124 cttatttaatatcagcttaccgcacacaagttccttctccttttctattgtcttttgttg 183
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttatttaatatcagctttccacacacaagttccttctccttttctattgtcttttgttg 383
Query: 184 gtgtagttgtctacatctatttccttaattaccaccaatatctagtcagttttgatatca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtagttgtctacatctatttccttaattaccaccaatatctagtcagttttgatatca 443
Query: 244 actcaagcaagccatagaccttgtttctccttttcatacctgggttgataatatcggttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actcaagcaagccatagaccttgtttctccttttcatacctgggttgataatatcggttg 503
Query: 304 agtgtcattttcattaatttttggaaccagcttacaaagctgcaggaaggtctttctgct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtgtcattttcattaatttttggaaccagcttacaaagctgcaggaaggtctttctgct 563
Query: 364 attctgctttagcgtgttgaaaatcgcattccctccatatgtgtctctcgttttactatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attctgctttagcgtgttgaaaatcgcattccctccatatgtgtctctcgttttactatt 623
Query: 424 tccagttaatctaaaaacatttcatagatttcctgccaggaagtcttgcgcatctcat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccagttaatctaaaaacatttcatagatttcctgccaggaagtcttgcgcatctcat 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_c24.g1 MSMg01no388_c24.g1 CHROMAT_FILE:
MSMg01no388_c24.g1 PHD_FILE: MSMg01no388_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:28 2005
(487 letters)
>mm_chr10_111612880_111613765
Length = 886
Score = 623 bits (322), Expect = 0.0
Identities = 439/490 (89%), Gaps = 27/490 (5%)
Strand = Plus / Plus
Query: 1 tgtagggtattttgatacacgtata--tatcaggataagcatattttctctaaatgcata 58
||||||||||||||||||| ||||| ||| | ||||||||| | |||| ||| ||||
Sbjct: 201 tgtagggtattttgatacatgtatatgtat--gaataagcatacctgctctgaatacata 258
Query: 59 tattaaagaaatgtatgccatccttcattttatgattgtcatagtaaaagttatctagta 118
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tattaaa-aaatgtatgccatccttcattttatgattgtcatagtaaaagttatctagta 317
Query: 119 gtaactatatctgtattttaaattgttatgttgaagaatatgagaattcaattgatatta 178
|||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 318 gtaactctatctctattttaaattgttatgttaaagaatatgagaatccaattgatatta 377
Query: 179 ttttatacttatatgttttatattgatatattttatagtattaaagttttcttttttact 238
||||||| ||| |||||||||||| ||||||| | ||||||| |
Sbjct: 378 ttttata---------ttt------atatattttatattattaaa----t-ttttttatt 417
Query: 239 taaatatgtctgttatgttatagtttcaaatatttgaaaggtataaaacactttaaaaat 298
|||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 418 taaatatgcctgatatgttatagtttcaaatatttgaaaagtataaaacactttaaaaat 477
Query: 299 agaggtttcatatagctcagattggaagacatctctgacata-caacgcaaaagtagcaa 357
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 478 agaggtttcatatagctcagattggaagacatctctgacatagaaac-taaaagtagcaa 536
Query: 358 tttgccaggctgaagcacaccattctgctgctttctgtggactgaaaatcagcagagcca 417
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 537 tttgccaggctgaaccacaccattctgctactttctgtggactgaaaatcagcagagcca 596
Query: 418 atcatttctctgctgctacatgataggcacctacacctgcagcgagacataagacagaat 477
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 597 atcatttctctgctgctacatgatagacacctacacctgcagccagacataagacagaag 656
Query: 478 ttatgtttga 487
| ||||||||
Sbjct: 657 tgatgtttga 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 886
Length adjustment: 10
Effective length of query: 477
Effective length of database: 876
Effective search space: 417852
Effective search space used: 417852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
