Query= MSMg01no388_h02.b1 MSMg01no388_h02.b1 CHROMAT_FILE:
MSMg01no388_h02.b1 PHD_FILE: MSMg01no388_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:47 2005
(547 letters)
>mm_chr10_68073550_68074499
Length = 950
Score = 978 bits (506), Expect = 0.0
Identities = 529/538 (98%), Gaps = 3/538 (0%)
Strand = Plus / Plus
Query: 13 gaattcaaaacctagggagctgtcaggagctagaaagaaaattattttttccttcccctt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattcaaaacctagggagctgtcaggagctagaaagaaaattattttttccttcccctt 272
Query: 73 tattctttataacacatcaacagcttgcaaattccctttttattaccatgcaatcaaggt 132
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 273 tattctttataacacatcaacagcttgcaaattccctttttattactatgcaatcaaggt 332
Query: 133 gcattgctttctcacaagacaattagttcttatttgtttgagtgagtactttattattca 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gcattgctttctcacaagacaattagttcttatttgtttgagtgagtactttattattca 392
Query: 193 cagggaaatagaagaatttcttgtaccaaacatctcctacctaatactaatctgtaatat 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cagggaaatagaagaatttcttgtaccaaacatctcctacctaatactaatctgtaatat 452
Query: 253 tcatgttggcaatagaacgttccgtttcattataccccagtaatgatcacaaacaagagt 312
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 453 tcatgttggcaatagaacgttccgtttcattatatccctgtaatgatcacaaacgagagt 512
Query: 313 ttgtctttggcatctgtaatgatggagaacagtgacacttgtgtgttgaacattcctcat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttgtctttggcatctgtaatgatggagaacagtgacacttgtgtgttgaacattcctcat 572
Query: 373 gtggtcgatagctaggcatcatttcaaggctcccagcaactcagcagagaaagatcaaag 432
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 573 gtggtcgatagctaggcatcatttcaatgctcccagcaactcagcagagaaagatcaaag 632
Query: 433 actgtc---attattatttccattttatgttcatgggggaaaaaagaaaatgcagtggca 489
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 633 actgtcgttattattatttccattttatgttcatgggggaaaaaagagaatgcagtggca 692
Query: 490 tcccccaaatcatgtcaagttaatggcgccctactgtgctttgcaaggaagattagga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tcccccaaatcatgtcaagttaatggcgccctactgtgctttgcaaggaagattagga 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 950
Length adjustment: 10
Effective length of query: 537
Effective length of database: 940
Effective search space: 504780
Effective search space used: 504780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_h02.g1 MSMg01no388_h02.g1 CHROMAT_FILE:
MSMg01no388_h02.g1 PHD_FILE: MSMg01no388_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:47 2005
(543 letters)
>mm_chr10_68270126_68271071
Length = 946
Score = 951 bits (492), Expect = 0.0
Identities = 529/546 (96%), Gaps = 11/546 (2%)
Strand = Plus / Minus
Query: 4 tgtagtattgtctcaccattgcgtgttgtctcatggaatttatgccttattgtttagtga 63
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtagtgttgtctcaccattgtgtgttgtctcatggaatttatgccttattgtttagtga 686
Query: 64 ccacttttttt-taaggcctacttcctttaggtacaataatgtggagttgtgttcagtga 122
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcactttttttgtaaggcctacttcctttaggtacaataatgtggagttgtgttcagtga 626
Query: 123 ttcttagtcttcttgtatatgaattagtcattaatgtaagaccgtgaatcaggcagaggg 182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 625 ttcttagtcttcttgtatatgaattagtcgttaatgtaagaccgtgaatcaggcagaggg 566
Query: 183 gattcgtctctgaccatcgcttagcttttgacttttggtttggttcggttttttggtttt 242
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gattcgtttctgaccatcgcttagcttttgacttttggtttggttcggttttttggtttt 506
Query: 243 ----atttttaatttgtcctggtaaggcttatatcaatgtttgaatacccaatatatttt 298
| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacca----taatttgtcctggcaaggcttatatcaatgtttgaatacccaatatatttt 450
Query: 299 gtctcttatctctatgatataggtattatttataagggcctagtgtaaaatttctgcagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtctcttatctctatgatataggtattatttataagggcctagtgtaaaatttctgcagt 390
Query: 359 atttctgctgaatttgacaatcggttaccatttcattgaaaacttatga--atatatata 416
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 389 atttctgctgaatttgacaatcggttaccatttcattgaaaacttatgaatatatatata 330
Query: 417 tattcttttactcctaagcctggcaggaagtttgttaattctccaaataaagtagtagct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tattcttttactcctaagcctggcaggaagtttgttaattctccaaataaagtagtagct 270
Query: 477 aatatcactttggcaactgaacaaaaaattgtttgctcacaatgagacaaactggaataa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aatatcactttggcaactgaacaaaaaattgtttgctcacaatgagacaaactggaataa 210
Query: 537 aaataa 542
||||||
Sbjct: 209 aaataa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 946
Length adjustment: 10
Effective length of query: 533
Effective length of database: 936
Effective search space: 498888
Effective search space used: 498888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
