Query= MSMg01no391_g13.b1 MSMg01no391_g13.b1 CHROMAT_FILE:
MSMg01no391_g13.b1 PHD_FILE: MSMg01no391_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:37 2005
(412 letters)
>mm_chr10_112281935_112282747
Length = 813
Score = 638 bits (330), Expect = 0.0
Identities = 393/414 (94%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 1 atttttaatggggttatttgattttctggagtccaccttcttgagttctctctatatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 atttttaatggggttatttgattttctggagtccaccttcttgagttctttatatatatt 260
Query: 61 ggatattagtcccctatctgatttaggataggtaaagatcctttctcaatatgttggtgg 120
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 261 ggatattagtcccctatctgatttaggataggtaaagatcctttttcaatctgttggtcg 320
Query: 121 cctttctgtgttattgacagtgtcttttgccttgcagaagctttgcagttttatgaggtc 180
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttctgtcttattgacggtgtcttttgccttgcagaagctttgcagttttatgaggtc 380
Query: 181 ccatttgttgattctccatcttacagcacaagccattgctg-aaagaaaaatattctaac 239
|||||||| | ||||| |||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 381 ccatttgtcggttctcgatcttacagcacaagccattgctgtaaa-aaaaatattctaac 439
Query: 240 agcattattattccagtgttttaaatataattctacaagtcacaagagagccagccacga 299
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 agcaacattattccaatgttttaaatataattctacaagtcacaagagagccagccatga 499
Query: 300 agagacaaattatctagattgagactgatgtgggcagtgcccgaatgggaactcctgggt 359
|||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| |
Sbjct: 500 agagacaaattatctagactgagactgatgtgggcagtgtctgaatgggaactcctggtt 559
Query: 360 aaaagagatattctttgaaggaat-aatccttcttacaagaggctttgtttaag 412
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 aaaagagatattctttgaaggaatgaatccttcttacaagaggctttgtttaag 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_g13.g1 MSMg01no391_g13.g1 CHROMAT_FILE:
MSMg01no391_g13.g1 PHD_FILE: MSMg01no391_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:37 2005
(238 letters)
>mm_chr10_112476212_112476849
Length = 638
Score = 400 bits (207), Expect = e-116
Identities = 228/235 (97%)
Strand = Plus / Minus
Query: 4 gaacccctcacaagggggtgtgagctatgagttataactactattaaaacaaataattat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaacccctcacaagggggtgtgagctatgagttataactactattaaaacaaataattat 379
Query: 64 gcacataataagagcttccttggaaaggaagaacattatgaactattgcctatgtcctgg 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 378 gcacataataagagcttccttggaaaggaagaacattatgaactgttgcctatgtcctgg 319
Query: 124 acagctgtcagcccgaccctacctgcccttaggggttggagggtagttggctcatagtcc 183
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 318 acagctctcagcccgaccctacctgcccttaggggttggagggtagttggctcagagtca 259
Query: 184 aggatacagactccgggagcaagtgagaaacgttgcagcaagctcatctgagcac 238
|||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 258 aggacacagattccgggagcaagtgagaaacgttgcagaaagctcatctgagcac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
