Query= MSMg01no393_g17.b1 MSMg01no393_g17.b1 CHROMAT_FILE:
MSMg01no393_g17.b1 PHD_FILE: MSMg01no393_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:21 2005
(517 letters)
>mm_chr10_102778317_102779233
Length = 917
Score = 868 bits (449), Expect = 0.0
Identities = 497/513 (96%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 6 gaattccaccatgctattttaaaaggattagaatcaccataagaaaaagtgcattaactt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaccatgctattttaaaaggattagaatcaccataagaaaaagtgcattaactt 265
Query: 66 ttcataacactacttattattaaataataccttgtaattctattatgataaaatcacaga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcataacactacttattattaaataataccttgtaattctattatgataaaatcacaga 325
Query: 126 atcatatcggataaaata-tataccacatagtataaatcatgtaaagtattttcttacca 184
||||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||
Sbjct: 326 atcatatcgtataaa-taatataccacatagtataaatcatgtaaagaattttcttaccg 384
Query: 185 tctaccattctttagggaagaatgcatacaaaagtagagaacaaacctaaaaggcaacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctaccattctttagggaagaatgcatacaaaagtagagaacaaacctaaaaggcaacag 444
Query: 245 aagatctaaataacatgaaccaaaatgtgagatagatatgcatatgactcatatgaattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 445 aagatctaaataacatgaaccaaaatgtgagatagatatgcatatgactcacaagaattg 504
Query: 305 ctattctgcagaattttatagaaaactgaaagaaaattgatttcatttggaacaaagaat 364
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttattctgcagaattatgtagaaaactgaaagaaaattgatttcatttggaacaaagaat 564
Query: 365 aagaaaatcattttgattatatggaaatgaatgagcaacatcatgggaaagaatggtagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 aagaaaatcattttgattatatggaaatgaatgagcaacatcatgggaaaggatggtagc 624
Query: 425 atcacagagctgctgttaatgaagggctcacaagggatcggtttagctcagatcagagaa 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 atcacagagctgctgttaatgaaggggtcacaagggatcggtttagctcagatcagagaa 684
Query: 485 tactgagcttgcatgaccaggacgcgggaggag 517
||||||||| ||||| |||||| || |||||||
Sbjct: 685 tactgagctcgcatggccaggatgcaggaggag 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_g17.g1 MSMg01no393_g17.g1 CHROMAT_FILE:
MSMg01no393_g17.g1 PHD_FILE: MSMg01no393_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:21 2005
(400 letters)
>mm_chr10_102960285_102961084
Length = 800
Score = 708 bits (366), Expect = 0.0
Identities = 372/374 (99%)
Strand = Plus / Minus
Query: 27 acctgtgattcgtgacccatttgggggttgaatgacccttttacaagggttggctttgac 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acctgtgattcgtgacccatttgggggttgaatgacccttttacaagggttggctttgac 741
Query: 87 cattaaaaaacacagatattgtgttacgattcataccagtagcaaacttacagttaggaa 146
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 740 cattaaaaaacacagatattgtgttacgattcataccaatagcaaacttacagttaggaa 681
Query: 147 gtagcaacaaaattaattttataataggacaacaccacaacatgaaaggattgcagtatt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtagcaacaaaattaattttataataggacaacaccacaacatgaaaggattgcagtatt 621
Query: 207 aagaagattgagaaccactgttctgggagaatctcattgatttgagatgactaccataag 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagaagattgagaaccactgttctgggagaatctcattgatttgagatgactaccataag 561
Query: 267 aaaccaggataagttaaacaaacaagaagtacatgtgtatgttatgaaacctttgtatgt 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaccaggataagttaaacaaacaagaagtacatgtgtatgttatgaaacctttgtatgt 501
Query: 327 taagtgctatttgtataaaatggaataactagaaggtttagtgtttgtttgttaatttag 386
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 500 taagtgctatttgtataaaatggaacaactagaaggtttagtgtttgtttgttaatttag 441
Query: 387 gtggaaactgctta 400
||||||||||||||
Sbjct: 440 gtggaaactgctta 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
